Evidence map›Paper›PMID 24564733›Full record

ArticleBMC genomics2013

Coffee component hydroxyl hydroquinone (HHQ) as a putative ligand for PPAR gamma and implications in breast cancer.

Babita Shashni, Karun Sharma, Rumani Singh, Kishore R Sakharkar, Sarinder K Dhillon, Yukio Nagasaki, Meena K Sakharkar

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in BMC genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 4 countries.

Babita Shashni
Karun Sharma
Rumani Singh
Kishore R Sakharkar
Sarinder K Dhillon
Yukio Nagasaki
Meena K Sakharkar
University of Tsukuba · JPNational Institute of Advanced Industrial Science and Technology · JPUniversity of Malaya · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCoffee contains several compounds that have the potential to influence breast cancer risk and survival. However, epidemiologic data on the relation between coffee compounds and breast cancer survival are sparse and inconsistent.

resultsWe show that coffee component HHQ has significant apoptotic effect on MDA-MB-231 and MCF-7 cells in vitro, and that ROS generation, change in mitochondrial membrane permeability, upregulation of Bax and Caspase-8 as well as down regulation of PGK1 and PKM2 expression may be important apoptosis-inducing mechanisms. The results suggest that PPARγ ligands may serve as potential therapeutic agents for breast cancer therapy. HHQ was also validated as a ligand for PPARγ by docking procedure.

conclusionThis is the first report on the anti-breast cancer (in vitro) activity of HHQ.

Indexed as

ApoptosisBreast NeoplasmsCaspase 8Cell Line, TumorCoffeeFemaleGene Expression Regulation, NeoplasticHumansHydroquinonesMCF-7 CellsMembrane Potential, MitochondrialModels, MolecularMolecular Docking SimulationPhosphoglycerate KinasePPAR gammaReactive Oxygen SpeciesCaspase 8CoffeehydroquinoneHydroquinonesPGK1 protein, humanPhosphoglycerate KinasePPAR gammaReactive Oxygen SpeciesRosiglitazoneThiazolidinediones

Identifiers

PMID24564733
PMCPMC3852186
OpenAlexW2138781330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.