Evidence map›Paper›PMID 24563701›Full record

ArticleCommunicative & integrative biology2013

New insights into the evolution and structure of Colletotrichum plant-like subtilisins (CPLSs).

Vinicio D Armijos Jaramillo, Walter A Vargas, Serenella A Sukno, Michael R Thon

Open access · goldAbstract read
In one paragraph

Article in Communicative & integrative biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Vinicio D Armijos JaramilloCentro Hispano-Luso de Investigaciones Agrarias; Departamento de Microbiología y Genética; Universidad de Salamanca; Villamayor, Spain.
Walter A VargasCentro Hispano-Luso de Investigaciones Agrarias; Departamento de Microbiología y Genética; Universidad de Salamanca; Villamayor, Spain ; Current affiliation: Centro de Estudios Fotosintéticos y Bioquímicos-CONICET; Facultad de Ciencias Bioquímicas y Farmacéuticas-UNR; Rosario, Argentina.
Serenella A SuknoCentro Hispano-Luso de Investigaciones Agrarias; Departamento de Microbiología y Genética; Universidad de Salamanca; Villamayor, Spain.
Michael R ThonCentro Hispano-Luso de Investigaciones Agrarias; Departamento de Microbiología y Genética; Universidad de Salamanca; Villamayor, Spain.
Universidad de Salamanca · ESCentro de Estudios Fotosintéticos y Bioquímicos · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Colletotrichum plant-like subtilisins (CPLSs) are a family of proteins found only in species of the phytopathogenic fungus Colletotrichum. CPLSs have high similarity to plant subtilisins and our previous work has shown that they were acquired by an ancient horizontal gene transfer event from plants. The rapid growth of sequence data in public databases enabled us to reexamine the structure and evolution of the CPLSs. A new plant subtilisin structural model aided us in refining the tertiary structure of CPLSs. Also, new information about protein interactions of plant subtilisin has provided new insights into the putative function of CPLSs. The availability of new genome sequences of members of the genus Colletotrichum gave us the opportunity to further validate our hypothesis that the CPLSs are unique to the Colletotrichum lineage. Together, this information furthers our knowledge of the potential role of the CPLSs in pathogenicity and the role of HGT in the genome evolution of plant pathogenic fungi.

Indexed as

ColletotrichumCPLSfungihorizontal gene transferphytopathogenplantssubtilisin

Identifiers

PMID24563701
PMCPMC3917961
OpenAlexW1998726342

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.