Evidence map›Paper›PMID 24563485›Full record

ArticleThe Journal of biological chemistry2014

Fibroblast growth factor-based signaling through synthetic heparan sulfate blocks copolymers studied using high cell density three-dimensional cell printing.

Eric Sterner, Sayaka Masuko, Guoyun Li, Lingyun Li, Dixy E Green, Nigel J Otto, Yongmei Xu, Paul L DeAngelis, Jian Liu, Jonathan S Dordick and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Engineered heparins as new anticoagulant drugs.Bioengineering & translational medicine · 2017
    Review
  11. Article
  12. Review
  13. Heparan sulfate and heparin interactions with proteins.Journal of the Royal Society, Interface · 2015
    Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Eric SternerFrom the Department of Chemical and Biological Engineering.
Sayaka Masuko
Guoyun Li
Lingyun Li
Dixy E Green
Nigel J Otto
Yongmei Xu
Paul L DeAngelis
Jian Liu
Jonathan S Dordick
Robert J Linhardt
Rensselaer Polytechnic Institute · USUniversity of Oklahoma Health Sciences Center · USUniversity of North Carolina at Chapel Hill · US

Funding

In vitro synthesis of recombinant heparan sulfateR01HL094463 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, JIAN, PAWLINSKI, RAFAL L · 2009 to 2021
$5.2M
Synthetic Heparan Sulfate: Probing Biosynthesis to Prepare Defined DrugsR01HL062244 · NHLBI · UNIVERSITY OF IOWA · PI DEANGELIS, PAUL L, LINHARDT, ROBERT J · 2001 to 2016
$4.1M
Development of a Bioengineered Heparin from a Non-Animal SourceR01HL096972 · NHLBI · RENSSELAER POLYTECHNIC INSTITUTE · PI DORDICK, JONATHAN S., LINHARDT, ROBERT J · 2009 to 2013
$3.9M
SEQUENCING THE POLYSACCHARIDE COMPONENT OF PROTEOGLYCANSR01GM038060 · NIGMS · UNIVERSITY OF IOWA · PI LINHARDT, ROBERT J · 1988 to 2012
$2.8M
High-Throughput Platform for Identifying Stem Cell ToxicityR01ES020903 · NIEHS · RENSSELAER POLYTECHNIC INSTITUTE · PI DORDICK, JONATHAN S., SCHAFFER, DAVID V · 2012 to 2015
$2.0M
Uncovering the controlling mechanisms in heparan sulfate biosynthesisU01GM102137 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, JIAN · 2013 to 2016
$1.2M
TeamChip for High-Throughput, Predictive Human Metabolism and Toxicology: Phase IR42ES018022 · NIEHS · SOLIDUS BIOSCIENCES, INC. · PI KWON, SEOK JOON · 2012 to 2013
$986k
TeamChip for High-throughput, Predictive Human Metabolism and ToxicologyR41ES018022 · NIEHS · SOLIDUS BIOSCIENCES, INC. · PI LEE, MOO-YEAL · 2010 to 2010
$150k
NHLBI NIH HHS HL096972NHLBI NIH HHS HL62244NHLBI NIH HHS R01 HL062244NHLBI NIH HHS R01 HL094463NHLBI NIH HHS R01 HL096972NIEHS NIH HHS ES 018022NIEHS NIH HHS ES 020903NIEHS NIH HHS R01 ES020903NIEHS NIH HHS R41 ES018022NIEHS NIH HHS R42 ES018022NIGMS NIH HHS GM38060NIGMS NIH HHS R01 GM038060NIGMS NIH HHS U01 GM102137
6 · The paper itself

Abstract

Four well-defined heparan sulfate (HS) block copolymers containing S-domains (high sulfo group content) placed adjacent to N-domains (low sulfo group content) were chemoenzymatically synthesized and characterized. The domain lengths in these HS block co-polymers were ~40 saccharide units. Microtiter 96-well and three-dimensional cell-based microarray assays utilizing murine immortalized bone marrow (BaF3) cells were developed to evaluate the activity of these HS block co-polymers. Each recombinant BaF3 cell line expresses only a single type of fibroblast growth factor receptor (FGFR) but produces neither HS nor fibroblast growth factors (FGFs). In the presence of different FGFs, BaF3 cell proliferation showed clear differences for the four HS block co-polymers examined. These data were used to examine the two proposed signaling models, the symmetric FGF2-HS2-FGFR2 ternary complex model and the asymmetric FGF2-HS1-FGFR2 ternary complex model. In the symmetric FGF2-HS2-FGFR2 model, two acidic HS chains bind in a basic canyon located on the top face of the FGF2-FGFR2 protein complex. In this model the S-domains at the non-reducing ends of the two HS proteoglycan chains are proposed to interact with the FGF2-FGFR2 protein complex. In contrast, in the asymmetric FGF2-HS1-FGFR2 model, a single HS chain interacts with the FGF2-FGFR2 protein complex through a single S-domain that can be located at any position within an HS chain. Our data comparing a series of synthetically prepared HS block copolymers support a preference for the symmetric FGF2-HS2-FGFR2 ternary complex model.

Indexed as

ErbB ReceptorsFibroblast Growth Factor 2Models, BiologicalReceptor, Fibroblast Growth Factor, Type 2Signal TransductionAnimalsCell Line, TransformedHeparan SulfateMiceOligonucleotide Array Sequence AnalysisEGFR protein, mouseErbB ReceptorsFgfr2 protein, mouseFibroblast Growth Factor 2Heparan SulfateReceptor, Fibroblast Growth Factor, Type 2Block CopolymersFibroblast Growth Factor (FGF)Fibroblast Growth Factor Receptor (FGFR)Fibroblast Growth FactorsGlycosaminoglycanHeparan SulfatePolysaccharideSignaling ComplexThree-dimensional Cellular Printing

Identifiers

PMID24563485
PMCPMC3975022
OpenAlexW2168449604

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.