Evidence map›Paper›PMID 24563202›Full record

ArticleThe Plant cell2014

The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley.

Abdellah Barakate, James D Higgins, Sebastian Vivera, Jennifer Stephens, Ruth M Perry, Luke Ramsay, Isabelle Colas, Helena Oakey, Robbie Waugh, F Chris H Franklin and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Understanding and harnessing unreduced gametes for crop improvement.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Molecular mechanisms and regulation of recombination frequency and distribution in plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Crossover interference mechanism: New lessons from plants.Frontiers in cell and developmental biology · 2023
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Abdellah BarakateDivision of Plant Sciences, College of Life Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom.
James D Higgins
Sebastian Vivera
Jennifer Stephens
Ruth M Perry
Luke Ramsay
Isabelle Colas
Helena Oakey
Robbie Waugh
F Chris H Franklin
Susan J Armstrong
Claire Halpin

Funding

Biotechnology and Biological Sciences Research Council BB/F019351/1Biotechnology and Biological Sciences Research Council BB/F020872/1Medical Research Council MR/K015869/1
6 · The paper itself

Abstract

In many cereal crops, meiotic crossovers predominantly occur toward the ends of chromosomes and 30 to 50% of genes rarely recombine. This limits the exploitation of genetic variation by plant breeding. Previous reports demonstrate that chiasma frequency can be manipulated in plants by depletion of the synaptonemal complex protein ZIPPER1 (ZYP1) but conflict as to the direction of change, with fewer chiasmata reported in Arabidopsis thaliana and more crossovers reported for rice (Oryza sativa). Here, we use RNA interference (RNAi) to reduce the amount of ZYP1 in barley (Hordeum vulgare) to only 2 to 17% of normal zygotene levels. In the ZYP1(RNAi) lines, fewer than half of the chromosome pairs formed bivalents at metaphase and many univalents were observed, leading to chromosome nondisjunction and semisterility. The number of chiasmata per cell was reduced from 14 in control plants to three to four in the ZYP1-depleted lines, although the localization of residual chiasmata was not affected. DNA double-strand break formation appeared normal, but the recombination pathway was defective at later stages. A meiotic time course revealed a 12-h delay in prophase I progression to the first labeled tetrads. Barley ZYP1 appears to function similarly to ZIP1/ZYP1 in yeast and Arabidopsis, with an opposite effect on crossover number to ZEP1 in rice, another member of the Poaceae.

Indexed as

Crossing Over, GeneticChromosomes, PlantDNA Breaks, Double-StrandedGene Expression Regulation, PlantGene Knockdown TechniquesHordeumMeiosisMeiotic Prophase IMolecular Sequence DataNondisjunction, GeneticPhylogenyPlant ProteinsPlants, Genetically ModifiedRNA InterferenceRNA, MessengerSynaptonemal ComplexPlant ProteinsRNA, Messenger

Identifiers

PMID24563202
PMCPMC3967036

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.