Evidence map›Paper›PMID 24561661›Full record

ArticleNature chemical biology2014

Tethered ligands reveal glutamate receptor desensitization depends on subunit occupancy.

Andreas Reiner, Ehud Y Isacoff

Abstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. A conserved peptide-binding pocket in HyNaC/ASIC ion channels.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Deuteration as a General Strategy to Enhance Azobenzene-Based Photopharmacology.Angewandte Chemie (International ed. in English) · 2024
    Article
  8. Review
  9. Article
  10. Interplay of Affinity and Surface Tethering in Protein Recognition.The journal of physical chemistry letters · 2022
    Article
  11. Photopharmacological modulation of native CRAC channels using azoboronate photoswitches.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Subunit-selective iGluR antagonists can potentiate heteromeric receptor responses by blocking desensitization.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Andreas ReinerDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA.
Ehud Y Isacoff1] Department of Molecular and Cell Biology, University of California, Berkeley, California, USA. [2] Helen Wills Neuroscience Institute, University of California, Berkeley, California, USA. [3] Physical Bioscience Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Funding

NDC for the Optical Control of Biological FunctionPN2EY018241 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 2006 to 2015
$37.5M
Scan of Protein Space for Optical Voltage ProbesU24NS057631 · NINDS · YALE UNIVERSITY · PI COHEN, LAWRENCE B · 2007 to 2011
$5.2M
Optical Control of Synaptic Transmission for in Vivo Analysis of Brain Circuits and BehaviorU01NS090527 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD, KRAMER, RICHARD H · 2014 to 2016
$2.4M
Optical Stimulation MicroscopeS10RR028971 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 2011 to 2011
$596k
NCRR NIH HHS S10 RR028971NEI NIH HHS 2PN2EY018241NEI NIH HHS PN2 EY018241NINDS NIH HHS U01 NS090527NINDS NIH HHS U24 NS057631NINDS NIH HHS U24NS057631
6 · The paper itself

Abstract

Cell signaling is often mediated by the binding of multiple ligands to multisubunit receptors. The probabilistic nature and sometimes slow rate of binding encountered with diffusible ligands can impede attempts to determine how the ligand occupancy controls signaling in such protein complexes. We describe a solution to this problem that uses a photoswitched tethered ligand as a 'ligand clamp' to induce rapid and stable binding and unbinding at defined subsets of subunits. We applied the approach to study gating in ionotropic glutamate receptors (iGluRs), ligand-gated ion channels that mediate excitatory neurotransmission and plasticity at glutamatergic synapses in the brain. We probed gating in two kainate-type iGluRs, GluK2 homotetramers and GluK2-GluK5 heterotetramers. Ultrafast (submillisecond) photoswitching of an azobenzene-based ligand on specific subunits provided a real-time measure of gating and revealed that partially occupied receptors can activate without desensitizing. The findings have implications for signaling by locally released and spillover glutamate.

Indexed as

AnimalsData Interpretation, StatisticalGlutamic AcidHEK293 CellsHumansIon Channel GatingIon ChannelsKainic AcidKineticsLigandsLightNeuronal PlasticityPatch-Clamp TechniquesRatsReceptors, GlutamateSignal TransductionGlutamic AcidIon ChannelsKainic AcidLigandsReceptors, Glutamate

Identifiers

PMID24561661
PMCPMC4041372

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.