Evidence map›Paper›PMID 24560811›Full record

ArticleBiochimica et biophysica acta2014

ND3, ND1 and 39kDa subunits are more exposed in the de-active form of bovine mitochondrial complex I.

Marion Babot, Paola Labarbuta, Amanda Birch, Sara Kee, Matthew Fuszard, Catherine H Botting, Ilka Wittig, Heinrich Heide, Alexander Galkin

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. The coupling mechanism of mammalian mitochondrial complex I.Nature structural & molecular biology · 2022
    Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Article
  10. Effect of Aging on Mitochondrial Energetics in the Human Atria.The journals of gerontology. Series A, Biological sciences and medical sciences · 2018
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Complex I assembly into supercomplexes determines differential mitochondrial ROS production in neurons and astrocytes.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marion BabotQueen's University Belfast, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Paola LabarbutaQueen's University Belfast, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Amanda BirchQueen's University Belfast, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Sara KeeQueen's University Belfast, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Matthew FuszardSchool of Chemistry, Biomedical Sciences Research Complex, BMS Annexe, University of St. Andrews, KY16 9ST, UK.
Catherine H BottingSchool of Chemistry, Biomedical Sciences Research Complex, BMS Annexe, University of St. Andrews, KY16 9ST, UK.
Ilka WittigFunctional Proteomics, SFB Core Unit, Faculty of Medicine, Goethe University Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany.
Heinrich HeideFunctional Proteomics, SFB Core Unit, Faculty of Medicine, Goethe University Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany.
Alexander GalkinQueen's University Belfast, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK. Electronic address: a.galkin@qub.ac.uk.

Funding

Medical Research Council G1100051
6 · The paper itself

Abstract

An intriguing feature of mitochondrial complex I from several species is the so-called A/D transition, whereby the idle enzyme spontaneously converts from the active (A) form to the de-active (D) form. The A/D transition plays an important role in tissue response to the lack of oxygen and hypoxic deactivation of the enzyme is one of the key regulatory events that occur in mitochondria during ischaemia. We demonstrate for the first time that the A/D conformational change of complex I does not affect the macromolecular organisation of supercomplexes in vitro as revealed by two types of native electrophoresis. Cysteine 39 of the mitochondrially-encoded ND3 subunit is known to become exposed upon de-activation. Here we show that even if complex I is a constituent of the I+III2+IV (S1) supercomplex, cysteine 39 is accessible for chemical modification in only the D-form. Using lysine-specific fluorescent labelling and a DIGE-like approach we further identified two new subunits involved in structural rearrangements during the A/D transition: ND1 (MT-ND1) and 39kDa (NDUFA9). These results clearly show that structural rearrangements during de-activation of complex I include several subunits located at the junction between hydrophilic and hydrophobic domains, in the region of the quinone binding site. De-activation of mitochondrial complex I results in concerted structural rearrangement of membrane subunits which leads to the disruption of the sealed quinone chamber required for catalytic turnover.

Indexed as

Amino Acid SequenceAnimalsCattleCysteineElectron Transport Complex IElectrophoresis, Polyacrylamide GelFluorescenceLysineMass SpectrometryMolecular Sequence DataNADOxidation-ReductionCysteineElectron Transport Complex ILysineNADA/D transitionComplex IConformational changeNADH:ubiquinone oxidoreductaseN-hydroxysuccinimideProtein tyrosine modification

Identifiers

PMID24560811
PMCPMC4331043

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.