Evidence map›Paper›PMID 24560150›Full record

ReviewProgress in molecular biology and translational science2014

Data-driven modeling of synaptic transmission and integration.

Jason S Rothman, R Angus Silver

Open access · greenAbstract readReview
In one paragraph

Review in Progress in molecular biology and translational science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

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  9. A Proposed Mechanism for Spontaneous Transitions between Interictal and Ictal Activity.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
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  14. Review
  15. Single granule cells excite Golgi cells and evoke feedback inhibition in the cochlear nucleus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jason S RothmanDepartment of Neuroscience, Physiology & Pharmacology, University College London, London, UK.
R Angus SilverDepartment of Neuroscience, Physiology & Pharmacology, University College London, London, UK.
University College London · GB

Funding

European Research Council 294667Wellcome Trust 086699Wellcome Trust 095667
6 · The paper itself

Abstract

In this chapter, we describe how to create mathematical models of synaptic transmission and integration. We start with a brief synopsis of the experimental evidence underlying our current understanding of synaptic transmission. We then describe synaptic transmission at a particular glutamatergic synapse in the mammalian cerebellum, the mossy fiber to granule cell synapse, since data from this well-characterized synapse can provide a benchmark comparison for how well synaptic properties are captured by different mathematical models. This chapter is structured by first presenting the simplest mathematical description of an average synaptic conductance waveform and then introducing methods for incorporating more complex synaptic properties such as nonlinear voltage dependence of ionotropic receptors, short-term plasticity, and stochastic fluctuations. We restrict our focus to excitatory synaptic transmission, but most of the modeling approaches discussed here can be equally applied to inhibitory synapses. Our data-driven approach will be of interest to those wishing to model synaptic transmission and network behavior in health and disease.

Indexed as

Models, NeurologicalStatistics as TopicAction PotentialsAnimalsComputer SimulationHumansStochastic ProcessesSynaptic TransmissionAMPA receptorChemical synapsesConductance waveformsDepletion modelsIntegrate-and-fire modelsMathematical modelsNMDA receptorPoisson spike trainsQuantal releaseShort-term plasticitySynaptic depressionSynaptic integrationSynaptic transmissionVesicular release

Identifiers

PMID24560150
PMCPMC4748401
OpenAlexW2414155050

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.