Evidence map›Paper›PMID 24559997›Full record

ArticleBiophysical journal2014

Genetic drift suppresses bacterial conjugation in spatially structured populations.

Peter D Freese, Kirill S Korolev, José I Jiménez, Irene A Chen

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. Biofilm architecture determines the dissemination of conjugative plasmids.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Macrocolony of NDM-1 ProducingPathogens (Basel, Switzerland) · 2019
    Article
  14. Article
  15. Bacterial growth: a statistical physicist's guide.Reports on progress in physics. Physical Society (Great Britain) · 2019
    Review
  16. Article
  17. Emergence of evolutionary driving forces in pattern-forming microbial populations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Peter D FreeseFAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts.
Kirill S KorolevFAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts; Department of Physics, Harvard University, Cambridge, Massachusetts; Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts; Department of Physics and Program in Bioinformatics, Boston University, Boston, Massachusetts.
José I JiménezFAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts; Faculty of Health and Medical Sciences, University of Surrey, United Kingdom.
Irene A ChenFAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts; Department of Chemistry and Biochemistry, Program in Biomolecular Sciences and Engineering, University of California at Santa Barbara, Santa Barbara, California. Electronic address: chen@chem.ucsb.edu.
Harvard University · USCenter for Systems Biology · USUniversity of Surrey · GB

Funding

THEORETICAL ANALYSIS OF FUNCTIONAL MODULESP50GM068763 · NIGMS · HARVARD UNIVERSITY · PI STERN, BODO · 2003 to 2012
$28.9M
NIGMS NIH HHS GM068763NIGMS NIH HHS P50 GM068763
6 · The paper itself

Abstract

Conjugation is the primary mechanism of horizontal gene transfer that spreads antibiotic resistance among bacteria. Although conjugation normally occurs in surface-associated growth (e.g., biofilms), it has been traditionally studied in well-mixed liquid cultures lacking spatial structure, which is known to affect many evolutionary and ecological processes. Here we visualize spatial patterns of gene transfer mediated by F plasmid conjugation in a colony of Escherichia coli growing on solid agar, and we develop a quantitative understanding by spatial extension of traditional mass-action models. We found that spatial structure suppresses conjugation in surface-associated growth because strong genetic drift leads to spatial isolation of donor and recipient cells, restricting conjugation to rare boundaries between donor and recipient strains. These results suggest that ecological strategies, such as enforcement of spatial structure and enhancement of genetic drift, could complement molecular strategies in slowing the spread of antibiotic resistance genes.

Indexed as

Conjugation, GeneticGenetic DriftModels, GeneticEscherichia coliF Factor

Identifiers

PMID24559997
PMCPMC3944618
OpenAlexW2060468818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.