Evidence map›Paper›PMID 24558262›Full record

ArticleGenetics2014

The fate of chromosomes and alleles in an allohexaploid Brassica population.

Annaliese S Mason, Matthew N Nelson, Junko Takahira, Wallace A Cowling, Gustavo Moreira Alves, Arkaprava Chaudhuri, Ning Chen, Mohana E Ragu, Jessica Dalton-Morgan, Olivier Coriton and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome composition in Brassica interspecific hybrids affects chromosome inheritance and viability of progeny.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  4. Article
  5. Production and cytology of Brassica autoallohexaploids with two and four copies of two subgenomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  6. Development ofFrontiers in genetics · 2022
    Article
  7. Article
  8. Article
  9. Hybrids between Brassica napus and B. nigra show frequent pairing between the B and A/C genomes and resistance to blackleg.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Article
  10. Article
  11. Development of Brassica oleracea-nigra monosomic alien addition lines: genotypic, cytological and morphological analyses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  12. Segregation for fertility and meiotic stability in novel Brassica allohexaploids.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  13. Distinct subgenome stabilities in synthesized Brassica allohexaploids.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  14. Molecular-cytogenetic characterization of C-genome chromosome substitution lines in Brassica juncea (L.) Czern and Coss.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 4 countries.

Annaliese S MasonSchool of Agriculture and Food Sciences and Centre for Integrative Legume Research, The University of Queensland, Brisbane Queensland 4072, Australia.
Matthew N Nelson
Junko Takahira
Wallace A Cowling
Gustavo Moreira Alves
Arkaprava Chaudhuri
Ning Chen
Mohana E Ragu
Jessica Dalton-Morgan
Olivier Coriton
Virginie Huteau
Frédérique Eber
Anne-Marie Chèvre
Jacqueline Batley
Agriculture and Food · AUInstitut de Génétique, Environnement et Protection des Plantes · FRUniversity of Queensland · AUUniversity of Western Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Production of allohexaploid Brassica (2n = AABBCC) is a promising goal for plant breeders due to the potential for hybrid heterosis and useful allelic contributions from all three of the Brassica genomes present in the cultivated diploid (2n = AA, 2n = BB, 2n = CC) and allotetraploid (2n = AABB, 2n = AACC, and 2n = BBCC) crop species (canola, cabbages, mustards). We used high-throughput SNP molecular marker assays, flow cytometry, and fluorescent in situ hybridization (FISH) to characterize a population of putative allohexaploids derived from self-pollination of a hybrid from the novel cross (B. napus × B. carinata) × B. juncea to investigate whether fertile, stable allohexaploid Brassica can be produced. Allelic segregation in the A and C genomes generally followed Mendelian expectations for an F2 population, with minimal nonhomologous chromosome pairing. However, we detected no strong selection for complete 2n = AABBCC chromosome complements, with weak correlations between DNA content and fertility (r(2) = 0.11) and no correlation between missing chromosomes or chromosome segments and fertility. Investigation of next-generation progeny resulting from one highly fertile F2 plant using FISH revealed general maintenance of high chromosome numbers but severe distortions in karyotype, as evidenced by recombinant chromosomes and putative loss/duplication of A- and C-genome chromosome pairs. Our results show promise for the development of meiotically stable allohexaploid lines, but highlight the necessity of selection for 2n = AABBCC karyotypes.

Indexed as

AllelesPolyploidyBrassicaChromosomes, PlantColchicineDNA, PlantFertilityGenome, PlantHybridization, GeneticIn Situ Hybridization, FluorescenceKaryotypingMeiosisPolymorphism, Single NucleotideColchicineDNA, PlantallohexaploidBrassicachromosome behaviorInfinium 60K SNP chipmolecular cytogenetics

Identifiers

PMID24558262
PMCPMC4012485
OpenAlexW2074449449

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.