Evidence map›Paper›PMID 24558196›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014

The number and location of EF hand motifs dictates the calcium dependence of polycystin-2 function.

Ivana Y Kuo, Camille Keeler, Rachel Corbin, Andjelka Ćelić, Edward T Petri, Michael E Hodsdon, Barbara E Ehrlich

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  10. Review
  11. Function and regulation of TRPP2 ion channel revealed by a gain-of-function mutant.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  12. Article
  13. Article
  14. Cyst formation following disruption of intracellular calcium signaling.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ivana Y Kuo2B.E.E., Department of Pharmacology, Yale University School of Medicine, 333 Cedar St, New Haven, CT 06520-8066, USA. barbara.ehrlich@yale.edu.
Camille Keeler
Rachel Corbin
Andjelka Ćelić
Edward T Petri
Michael E Hodsdon
Barbara E Ehrlich
Yale University · US

Funding

Center for Polycystic Kidney Disease Research at YaleP30DK090744 · NIDDK · YALE UNIVERSITY · PI CAPLAN, MICHAEL J. · 2010 to 2014
$5.6M
Regulation of cholangiocytes by InsP3 receptor isoformsR01DK061747 · NIDDK · YALE UNIVERSITY · PI EHRLICH, BARBARA E., NATHANSON, MICHAEL H · 2003 to 2012
$3.4M
Regulation of polycystin-2 channel activityR01DK087844 · NIDDK · YALE UNIVERSITY · PI BOGGON, TITUS JONATHON, EHRLICH, BARBARA E. · 2010 to 2013
$1.6M
Asymmetric flow FFF and Composition Gradient/Light Scattering SystemS10RR023748 · NCRR · YALE UNIVERSITY · PI FOLTA-STOGNIEW, EWA JOANNA · 2007 to 2007
$271k
NCRR NIH HHS 1S10RR023748-01NCRR NIH HHS S10 RR023748NIDDK NIH HHS P30 DK090744NIDDK NIH HHS P30 DK090744INIDDK NIH HHS R01 DK061747NIDDK NIH HHS R01 DK087844NIDDK NIH HHS R01 DK61747
6 · The paper itself

Abstract

Polycystin 2 (PC2) is a calcium-dependent calcium channel, and mutations to human PC2 (hPC2) are associated with polycystic kidney disease. The C-terminal tail of hPC2 contains 2 EF hand motifs, but only the second binds calcium. Here, we investigate whether these EF hand motifs serve as a calcium sensor responsible for the calcium dependence of PC2 function. Using NMR and bioinformatics, we show that the overall fold is highly conserved, but in evolutionarily earlier species, both EF hands bind calcium. To test whether the EF hand motif is truly a calcium sensor controlling PC2 channel function, we altered the number of calcium binding sites in hPC2. NMR studies confirmed that modified hPC2 binds an additional calcium ion. Single-channel recordings demonstrated a leftward shift in the calcium dependence, and imaging studies in cells showed that calcium transients were enhanced compared with wild-type hPC2. However, biophysics and functional studies showed that the first EF hand can only bind calcium and be functionally active if the second (native) calcium-binding EF hand is intact. These results suggest that the number and location of calcium-binding sites in the EF hand senses the concentration of calcium required for PC2 channel activity and cellular function.

Indexed as

EF Hand MotifsAmino Acid MotifsAmino Acid SequenceAnimalsBinding SitesCalciumCalcium ChannelsCell LineComputational BiologyHumansKidneyLipid BilayersMagnetic Resonance SpectroscopyMolecular Sequence DataPhylogenyPlasmidsCalciumCalcium ChannelsLipid BilayersTRPP Cation Channelsintracellular releaseion channelskidneysignalingTRP channels

Identifiers

PMID24558196
PMCPMC3986840
OpenAlexW2106752615

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.