Evidence map›Paper›PMID 24555035›Full record

ArticleF1000Research2013

UVB irradiation does not directly induce detectable changes of DNA methylation in human keratinocytes.

Christoph Lahtz, Sang-In Kim, Steven E Bates, Arthur X Li, Xiwei Wu, Gerd P Pfeifer

Open access · goldAbstract read
In one paragraph

Article in F1000Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christoph LahtzDepartment of Cancer Biology, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Sang-In KimDepartment of Cancer Biology, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Steven E BatesDepartment of Cancer Biology, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Arthur X LiDepartment of Information Sciences, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Xiwei WuDepartment of Molecular Medicine, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Gerd P PfeiferDepartment of Cancer Biology, Beckman Research Institute, City of Hope, Duarte, 91010, USA.
Beckman Research InstituteCity of Hope · US

Funding

UV damage, repair, and mutagenesisR37ES006070 · NIEHS · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI PFEIFER, GERD P · 2004 to 2013
$3.7M
UV DAMAGE, REPAIR AND MUTAGENESISR01ES006070 · NIEHS · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI PFEIFER, GERD P · 1992 to 2003
$1.1M
NIEHS NIH HHS R01 ES006070NIEHS NIH HHS R37 ES006070
6 · The paper itself

Abstract

Unprotected exposure to UVB radiation from the sun and the resulting DNA damage are thought to be responsible for physiological changes in the skin and for a variety of skin cancers, including basal cell and squamous cell carcinoma and malignant melanoma. Although the mutagenic effects of UVB have been well documented and studied mechanistically, there is only limited information as to whether UV light may also be responsible for inducing epigenetic changes in the genome of exposed cells. DNA methylation is a stable epigenetic modification involved in gene control. To study the effects of UVB radiation on DNA methylation, we repeatedly exposed normal human keratinocytes to a UVB light source. After a recovery period, we analyzed global DNA methylation patterns in the irradiated and control cells using the methylated-CpG island recovery assay (MIRA) method in combination with high-resolution microarrays. Bioinformatics analysis revealed only a limited number of possible differences between UVB-exposed and control cells. However, these minor apparent changes could not be independently confirmed by bisulfite sequencing-based approaches. This study reveals that UVB irradiation of keratinocytes has no recognizable global effect on DNA methylation patterns and suggests that changes in DNA methylation, as observed in skin cancers, are not immediate consequences of human exposure to solar UVB irradiation.

Identifiers

PMID24555035
PMCPMC3901454
OpenAlexW2044677786

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.