Evidence map›Paper›PMID 24552432›Full record

ArticleThe Biochemical journal2014

Altered native stability is the dominant basis for susceptibility of α1-antitrypsin mutants to polymerization.

James A Irving, Imran Haq, Jennifer A Dickens, Sarah V Faull, David A Lomas

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. The mechanism of pathogenic αProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Recommendations for the diagnosis and treatment of alpha-1 antitrypsin deficiency.Jornal brasileiro de pneumologia : publicacao oficial da Sociedade Brasileira de Pneumologia e Tisilogia · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The structural basis for Z αScience advances · 2020
    Article
  12. Engineering the serpin αProtein science : a publication of the Protein Society · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Deficiency Mutations of Alpha-1 Antitrypsin. Effects on Folding, Function, and Polymerization.American journal of respiratory cell and molecular biology · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

James A Irving*Cambridge Institute for Medical Research, Department of Medicine, University of Cambridge, Wellcome Trust/MRC Building, Hills Road, Cambridge CB2 0XY, U.K.
Imran Haq†Wolfson Institute for Biomedical Research, The Cruciform Building, University College London, Gower Street, London WC1E 6BT, U.K.
Jennifer A Dickens*Cambridge Institute for Medical Research, Department of Medicine, University of Cambridge, Wellcome Trust/MRC Building, Hills Road, Cambridge CB2 0XY, U.K.
Sarah V Faull*Cambridge Institute for Medical Research, Department of Medicine, University of Cambridge, Wellcome Trust/MRC Building, Hills Road, Cambridge CB2 0XY, U.K.
David A Lomas†Wolfson Institute for Biomedical Research, The Cruciform Building, University College London, Gower Street, London WC1E 6BT, U.K.
Wellcome/MRC Cambridge Stem Cell Institute · GBUniversity College London · GB

Funding

Medical Research Council G0901786Medical Research Council G1000277
6 · The paper itself

Abstract

Serpins are protease inhibitors whose most stable state is achieved upon transition of a central 5-stranded β-sheet to a 6-stranded form. Mutations, low pH, denaturants and elevated temperatures promote this transition, which can result in a growing polymer chain of inactive molecules. Different types of polymer are possible, but, experimentally only heat has been shown to generate polymers in vitro consistent with ex vivo pathological specimens. Many mutations that alter the rate of heat-induced polymerization have been described, but interpretation is problematic because discrimination is lacking between the effect of global changes in native stability and specific effects on structural mechanism. We show that the temperature midpoint (Tm) of thermal denaturation reflects the transition of α1-antitrypsin to the polymerization intermediate, and determine the relationship with fixed-temperature polymerization half-times (t0.5) in the presence of stabilizing additives [TMAO (trimethylamine N-oxide), sucrose and sodium sulfate], point mutations and disulfide bonds. Combined with a retrospective analysis of 31 mutants characterized in the literature, the results of the present study show that global changes to native state stability are the predominant basis for the effects of mutations and osmolytes on heat-induced polymerization, summarized by the equation: ln(t0.5,mutant/t0.5,wild-type)=0.34×ΔTm. It is deviations from this relationship that hold key information about the polymerization process.

Indexed as

Polymerizationalpha 1-AntitrypsinAmino Acid SubstitutionAnimalsCattleChymotrypsinCircular DichroismPoint MutationProtein StabilityRecombinant ProteinsRetrospective StudiesTemperaturealpha 1-Antitrypsinalpha-chymotrypsinChymotrypsinRecombinant Proteins

Identifiers

PMID24552432
PMCPMC4080824
OpenAlexW2322425412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.