Evidence map›Paper›PMID 24552154›Full record

ArticleBMC gastroenterology2014

Clinical relevance of the cagA, tnpA and tnpB genes in Helicobacter pylori.

Amin Talebi Bezmin Abadi, Ashraf Mohhabati Mobarez, Marc J M Bonten, Jaap A Wagenaar, Johannes G Kusters

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Determination of GenesThe Yale journal of biology and medicine · 2025
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  4. Antibiotic Resistance Rates forMicroorganisms · 2023
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  6. Dysregulation of lncRNA inBioMed research international · 2021
    Review
  7. Article
  8. Role ofWorld journal of gastroenterology · 2016
    Review
  9. Helicobacter pylori and Gastric Cancer.Frontiers in medicine · 2016
    Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Amin Talebi Bezmin Abadi
Ashraf Mohhabati Mobarez
Marc J M Bonten
Jaap A Wagenaar
Johannes G KustersDepartment of Medical Microbiology, University Medical Center Utrecht, Heidelberglaan 100, Utrecht 3584 CX, The Netherlands. h.kusters@umcutrecht.nl.
University Medical Center Utrecht · NLHeidelberg University · DETarbiat Modares University · IRUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNumerous proteins have been proposed as virulence factors for the gram negative gastric bacterium Helicobacter pylori but only for a few this has unequivocally been demonstrated. The aim of the current study was to evaluate the association of the putative virulence factors tnpA and tnpB (no cagA) with H. pylori associated gastroduodenal diseases.

methodsA PCR based assay was used to determine the presence of the tnpA and tnpB genes, as well as of cagA, in 360H. pylori strains isolated from H. pylori infected patients.

resultsOf 360 H. pylori culture positive patients (196 men, 164 women; average age 42.1 years (range 17-73), 95 had gastritis, 92 had gastric ulcers, 108 had duodenal ulcers, and 65 had gastric cancer. Using the gastritis group as a reference a significantly aberrant gene distribution was observed for the tnpA (Relative risk: 1.45; 95% CI 1.04-1.93), the cagA (Relative risk: 1.81; 95% CI 1.44-2.29), but not the tnpB gene in the gastric cancer group.

conclusionsThe increased incidence of the tnpA gene in gastric cancer patients suggests a role of the tnpA gene in the development of H. pylori induced gastric cancer.

Indexed as

AdolescentAdultAgedAntigens, BacterialBacterial ProteinsCross-Sectional StudiesDNA, BacterialDuodenal UlcerFemaleGastritisHelicobacter InfectionsHelicobacter pyloriHumansIranMaleMiddle AgedAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriDNA, BacterialVirulence Factors

Identifiers

PMID24552154
PMCPMC3938475
OpenAlexW2104279862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.