Evidence map›Paper›PMID 24551083›Full record

ArticlePloS one2014

A modular plasmid assembly kit for multigene expression, gene silencing and silencing rescue in plants.

Andreas Binder, Jayne Lambert, Robert Morbitzer, Claudia Popp, Thomas Ott, Thomas Lahaye, Martin Parniske

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed.

  1. Article
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  5. Review
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  9. Engineering and comparison of cas12a-based genome editing systems in plants.The Plant journal : for cell and molecular biology · 2025
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  10. Article
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  12. Article
  13. Review
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  19. Assembling DNA Plasmids with the Multi-Kingdom (MK) Cloning System.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andreas BinderFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Jayne LambertFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Robert MorbitzerFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Claudia PoppFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Thomas OttFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Thomas LahayeFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.
Martin ParniskeFaculty of Biology, Genetics, University of Munich (LMU), Martinsried, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Golden Gate (GG) modular assembly approach offers a standardized, inexpensive and reliable way to ligate multiple DNA fragments in a pre-defined order in a single-tube reaction. We developed a GG based toolkit for the flexible construction of binary plasmids for transgene expression in plants. Starting from a common set of modules, such as promoters, protein tags and transcribed regions of interest, synthetic genes are assembled, which can be further combined to multigene constructs. As an example, we created T-DNA constructs encoding multiple fluorescent proteins targeted to distinct cellular compartments (nucleus, cytosol, plastids) and demonstrated simultaneous expression of all genes in Nicotiana benthamiana, Lotus japonicus and Arabidopsis thaliana. We assembled an RNA interference (RNAi) module for the construction of intron-spliced hairpin RNA constructs and demonstrated silencing of GFP in N. benthamiana. By combination of the silencing construct together with a codon adapted rescue construct into one vector, our system facilitates genetic complementation and thus confirmation of the causative gene responsible for a given RNAi phenotype. As proof of principle, we silenced a destabilized GFP gene (dGFP) and restored GFP fluorescence by expression of a recoded version of dGFP, which was not targeted by the silencing construct.

Indexed as

Gene Expression Regulation, PlantGene SilencingPlasmidsArabidopsisDNA, BacterialGene ExpressionGenetic Complementation TestGenetic EngineeringGreen Fluorescent ProteinsIntronsLotusNicotianaPhenotypePlants, Genetically ModifiedTransgenesDNA, BacterialGreen Fluorescent ProteinsT-DNA

Identifiers

PMID24551083
PMCPMC3923767

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.