Evidence map›Paper›PMID 24550656›Full record

ArticleJournal of Korean medical science2014

Microarray analysis for genes associated with angiogenesis in diabetic OLETF keratocytes.

Jun-Mo Park, Young Min Park, Wook Jung, Ji-Eun Lee, Jong-Soo Lee

Open access · goldAbstract read
In one paragraph

Article in Journal of Korean medical science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jun-Mo ParkDepartment of Ophthalmology, Busan St. Mary's Hospital, Busan, Korea.ORCID 0000-0002-3942-3989
Young Min ParkDepartment of Ophthalmology, School of Medicine, Pusan National University and Medical Research Institute, Pusan National University Hospital, Busan, Korea.ORCID 0000-0001-8495-9224
Wook JungDepartment of Ophthalmology, School of Medicine, Pusan National University and Medical Research Institute, Pusan National University Hospital, Busan, Korea.ORCID 0000-0003-2364-9526
Ji-Eun LeeDepartment of Ophthalmology, School of Medicine, Pusan National University and Medical Research Institute, Pusan National University Hospital, Busan, Korea.ORCID 0000-0002-4927-2854
Jong-Soo LeeDepartment of Ophthalmology, School of Medicine, Pusan National University and Medical Research Institute, Pusan National University Hospital, Busan, Korea.ORCID 0000-0002-1052-2924
Pusan National University · KRSt. Mary's Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of this study was to identify the differences in angiogenesis gene expression between normal and diabetic keratocytes stimulated with interleukin-1α (IL-1α) and tumor necrosis factor-α (TNF-α). Primarily cultured normal and diabetic keratocytes were treated with 20 ng/mL of IL-1a and TNF-α for 6 hr. cDNA was hybridized to an oligonucleotide microarray. Microarray analysis was used to identify differentially expressed genes that were further evaluated by real-time polymerase chain reaction (RT-PCR). Diabetes keratocytes overexpressed vital components of angiogenesis including Agtr1, and under-expressed components related to the blood vessel maturation, including Dcn. Cytokine-treated diabetic keratocytes differentially expressed components of angiogenesis. OLETF keratocytes after treatment with IL-1α and TNF-α showed the newly expressed 15 and 14 genes, respectively. Newly and commonly under-expressed five genes followed by treatment with both IL-1α and TNF-α were also evident. RT-PCR showed results similar to the microarray results. Agtr1 and Itga1 showed an increased expression in diabetic keratocytes compared with normal corneal keratocytes, especially after TNF-α treatment. Il6 appeared strong expression after interleukin-1α treatment, but showed down expression after TNF-α treatment. Further studies to analyze and confirm the significance of the identified angiogenetic genes of diabetes are needed.

Indexed as

Oligonucleotide Array Sequence AnalysisAnimalsCells, CulturedGene Expression RegulationInterleukin-1alphaKeratinocytesNeovascularization, PhysiologicRatsReal-Time Polymerase Chain ReactionReceptor, Angiotensin, Type 1Tumor Necrosis Factor-alphaAgtr1a protein, ratInterleukin-1alphaReceptor, Angiotensin, Type 1Tumor Necrosis Factor-alphaAngiogenesisCorneal KeratocyteCytokinesInflammationMicroarray AnalysisOLETF

Identifiers

PMID24550656
PMCPMC3924008
OpenAlexW2106441298

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.