Evidence map›Paper›PMID 24550484›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Structural motif of polyglutamine amyloid fibrils discerned with mixed-isotope infrared spectroscopy.

Lauren E Buchanan, Joshua K Carr, Aaron M Fluitt, Andrew J Hoganson, Sean D Moran, Juan J de Pablo, James L Skinner, Martin T Zanni

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 121 citations in OpenAlex.

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  11. Biallelic variants in SLC4A10 encoding a sodium-dependent bicarbonate transporter lead to a neurodevelopmental disorder.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
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  12. Noble Metal Nanoparticles with Nanogel Coatings: Coinage Metal Thiolate-Stabilized Glutathione Hydrogel Shells.The journal of physical chemistry. C, Nanomaterials and interfaces · 2024
    Article
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  19. Membrane-dependent amyloid aggregation of human BAX α9 (173-192).Protein science : a publication of the Protein Society · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lauren E BuchananDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706-1396.
Joshua K Carr
Aaron M Fluitt
Andrew J Hoganson
Sean D Moran
Juan J de Pablo
James L Skinner
Martin T Zanni
University of Wisconsin–Madison · USArgonne National Laboratory · USUniversity of Chicago · US

Funding

Structural mechanism of diabetic amyloid formationR01DK079895 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Martin T Zanni · 2008 to 2026
$7.7M
Mechanism of membrane-catalyzed amyloid formation in diabetesR01DK088184 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI DE PABLO, JUAN J, SKINNER, JAMES L · 2010 to 2011
$708k
NIDDK NIH HHS DK088184NIDDK NIH HHS DK79895NIDDK NIH HHS R01 DK079895NIDDK NIH HHS R01 DK088184
6 · The paper itself

Abstract

Polyglutamine (polyQ) sequences are found in a variety of proteins, and mutational expansion of the polyQ tract is associated with many neurodegenerative diseases. We study the amyloid fibril structure and aggregation kinetics of K2Q24K2W, a model polyQ sequence. Two structures have been proposed for amyloid fibrils formed by polyQ peptides. By forming fibrils composed of both (12)C and (13)C monomers, made possible by protein expression in Escherichia coli, we can restrict vibrational delocalization to measure 2D IR spectra of individual monomers within the fibrils. The spectra are consistent with a β-turn structure in which each monomer forms an antiparallel hairpin and donates two strands to a single β-sheet. Calculated spectra from atomistic molecular-dynamics simulations of the two proposed structures confirm the assignment. No spectroscopically distinct intermediates are observed in rapid-scan 2D IR kinetics measurements, suggesting that aggregation is highly cooperative. Although 2D IR spectroscopy has advantages over linear techniques, the isotope-mixing strategy will also be useful with standard Fourier transform IR spectroscopy.

Indexed as

Amino Acid MotifsAmyloidAnimalsCarbon IsotopesModels, MolecularOptical PhenomenaPeptidesPorphyrinsProtein BindingSpectrophotometry, InfraredSperm WhaleSpin LabelsThermodynamicsAmyloidCarbon IsotopesPeptidespolyglutaminePorphyrinsSpin Labelsantiparallel β-sheetsHuntington diseaseisotope dilutiontwo-dimensional infrared spectroscopy

Identifiers

PMID24550484
PMCPMC4000827
OpenAlexW2073922528

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.