Evidence map›Paper›PMID 24550463›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Sudestada1, a Drosophila ribosomal prolyl-hydroxylase required for mRNA translation, cell homeostasis, and organ growth.

Maximiliano J Katz, Julieta M Acevedo, Christoph Loenarz, Diego Galagovsky, Phebee Liu-Yi, Marcelo Pérez-Pepe, Armin Thalhammer, Rok Sekirnik, Wei Ge, Mariana Melani and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 52 citations in OpenAlex.

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  9. Review
  10. Oxygen sensing in crustaceans: functions and mechanisms.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2021
    Review
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  19. YcfDExtremophiles : life under extreme conditions · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 2 countries.

Maximiliano J KatzFundación Instituto Leloir, C1405BWE Buenos Aires, Argentina.
Julieta M Acevedo
Christoph Loenarz
Diego Galagovsky
Phebee Liu-Yi
Marcelo Pérez-Pepe
Armin Thalhammer
Rok Sekirnik
Wei Ge
Mariana Melani
María G Thomas
Sergio Simonetta
Graciela L Boccaccio
Christopher J Schofield
Matthew E Cockman
Peter J Ratcliffe
Pablo Wappner
University of Oxford · GBConsejo Nacional de Investigaciones Científicas y Técnicas · ARFundación Instituto Leloir · AR

Funding

Biotechnology and Biological Sciences Research CouncilWellcome Trust 087675MA
6 · The paper itself

Abstract

Genome sequences predict the presence of many 2-oxoglutarate (2OG)-dependent oxygenases of unknown biochemical and biological functions in Drosophila. Ribosomal protein hydroxylation is emerging as an important 2OG oxygenase catalyzed pathway, but its biological functions are unclear. We report investigations on the function of Sudestada1 (Sud1), a Drosophila ribosomal oxygenase. As with its human and yeast homologs, OGFOD1 and Tpa1p, respectively, we identified Sud1 to catalyze prolyl-hydroxylation of the small ribosomal subunit protein RPS23. Like OGFOD1, Sud1 catalyzes a single prolyl-hydroxylation of RPS23 in contrast to yeast Tpa1p, where Pro-64 dihydroxylation is observed. RNAi-mediated Sud1 knockdown hinders normal growth in different Drosophila tissues. Growth impairment originates from both reduction of cell size and diminution of the number of cells and correlates with impaired translation efficiency and activation of the unfolded protein response in the endoplasmic reticulum. This is accompanied by phosphorylation of eIF2α and concomitant formation of stress granules, as well as promotion of autophagy and apoptosis. These observations, together with those on enzyme homologs described in the companion articles, reveal conserved biochemical and biological roles for a widely distributed ribosomal oxygenase.

Indexed as

AnimalsAnimals, Genetically ModifiedApoptosisAutophagyBlotting, WesternBody Weights and MeasuresChromatography, LiquidDNA PrimersDrosophilaDrosophila ProteinsFat BodyFemaleGene Knockdown TechniquesHomeostasisHydroxylationProlyl HydroxylasesDNA PrimersDrosophila ProteinsProlyl HydroxylasesRibosomal Proteinssud1 protein, Drosophiladioxygenasefruit flyprolineribosometranlational stress

Identifiers

PMID24550463
PMCPMC3964085
OpenAlexW1988699735

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.