Evidence map›Paper›PMID 24550243›Full record

ArticlePlant physiology2014

Apyrase suppression raises extracellular ATP levels and induces gene expression and cell wall changes characteristic of stress responses.

Min Hui Lim, Jian Wu, Jianchao Yao, Ignacio F Gallardo, Jason W Dugger, Lauren J Webb, James Huang, Mari L Salmi, Jawon Song, Greg Clark and 1 more

Abstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  10. Genome-wide identification and analyses ofMolecular breeding : new strategies in plant improvement · 2024
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  13. Review
  14. Genome-Wide Investigation of Apyrase (APY) Genes in Peanut (International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Min Hui LimDepartments of Molecular Biosciences and.
Jian Wu
Jianchao Yao
Ignacio F Gallardo
Jason W Dugger
Lauren J Webb
James Huang
Mari L Salmi
Jawon Song
Greg Clark
Stanley J Roux

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant cells release ATP into their extracellular matrix as they grow, and extracellular ATP (eATP) can modulate the rate of cell growth in diverse tissues. Two closely related apyrases (APYs) in Arabidopsis (Arabidopsis thaliana), APY1 and APY2, function, in part, to control the concentration of eATP. The expression of APY1/APY2 can be inhibited by RNA interference, and this suppression leads to an increase in the concentration of eATP in the extracellular medium and severely reduces growth. To clarify how the suppression of APY1 and APY2 is linked to growth inhibition, the gene expression changes that occur in seedlings when apyrase expression is suppressed were assayed by microarray and quantitative real-time-PCR analyses. The most significant gene expression changes induced by APY suppression were in genes involved in biotic stress responses, which include those genes regulating wall composition and extensibility. These expression changes predicted specific chemical changes in the walls of mutant seedlings, and two of these changes, wall lignification and decreased methyl ester bonds, were verified by direct analyses. Taken together, the results are consistent with the hypothesis that APY1, APY2, and eATP play important roles in the signaling steps that link biotic stresses to plant defense responses and growth changes.

Indexed as

Gene Expression Regulation, PlantStress, PhysiologicalAdenosine TriphosphateApyraseArabidopsisArabidopsis ProteinsCell WallDown-RegulationExtracellular MatrixExtracellular SpaceGene OntologyGenes, PlantHydrogen PeroxideLigninMutationOligonucleotide Array Sequence AnalysisAdenosine TriphosphateAPY1 protein, ArabidopsisAPY2 protein, ArabidopsisApyraseArabidopsis ProteinsHydrogen PeroxideLigninPeroxidaseRNA, Messenger

Identifiers

PMID24550243
PMCPMC3982762

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.