Evidence map›Paper›PMID 24549664›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2014

In vitro systems for coupling RNAP II transcription to splicing and polyadenylation.

Eric G Folco, Robin Reed

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. FUS functions in coupling transcription to splicing by mediating an interaction between RNAP II and U1 snRNP.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Eric G FolcoDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Robin Reed

Funding

MECHANISMS OF PREMRNA SPLICING IN HIGHER EUKARYOTESR01GM043375 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REED, ROBIN E. · 1990 to 2015
$12.6M
Functional Coupling of Steps in Genes ExpressionR56GM043375 · NIGMS · HARVARD MEDICAL SCHOOL · PI REED, ROBIN E · 2007 to 2007
$563k
NIGMS NIH HHS GM043375NIGMS NIH HHS R01 GM043375NIGMS NIH HHS R56 GM043375
6 · The paper itself

Abstract

Studies over the past several years have revealed that steps in gene expression are extensively coupled to one another both physically and functionally. Recently, in vitro systems were developed for understanding the mechanisms involved in coupling transcription by RNA polymerase II to RNA processing. Here we describe an efficient two-way system for coupling transcription to splicing and a robust three-way system for coupling transcription, splicing, and polyadenylation. In these systems a CMV-DNA construct is incubated in HeLa cell nuclear extracts in the presence of (32)P-UTP to generate the nascent transcript. Transcription is then stopped by addition of α-amanitin followed by continued incubation to allow RNA processing.

Indexed as

Transcription, GeneticAlternative SplicingCell ExtractsCell NucleusHeLa CellsHumansMolecular BiologyPolyadenylationRNA Polymerase IIRNA PrecursorsCell ExtractsRNA Polymerase IIRNA Precursors

Identifiers

PMID24549664
PMCPMC4062303

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.