Evidence map›Paper›PMID 24534842›Full record

ArticleMarine drugs2014

Transcriptional changes caused by bisphenol A in Oryzias javanicus, a fish species highly adaptable to environmental salinity.

Seonock Woo, Vianney Denis, Seungshic Yum

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Seonock WooSouth Sea Environment Research Division, Korea Institute of Ocean Science and Technology, Geoje 656-830, Korea. cwoo@kiost.ac.
Vianney DenisBiodiversity Research Centre, Academia Sinica, Taipei 115, Taiwan. vianney.denis@gmail.com.
Seungshic YumSouth Sea Environment Research Division, Korea Institute of Ocean Science and Technology, Geoje 656-830, Korea. syum@kiost.ac.
Korea Institute of Ocean Science and Technology · KRBiodiversity Research Center, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Javanese medaka, Oryzias javanicus, is a fish highly adaptable to various environmental salinities. Here, we investigated the effects of the environmental pollutant bisphenol A (BPA; an endocrine disrupting chemical) on gene expression levels in this species acclimated to different salinities. Using cDNA microarrays, we detected the induction of differential expression of genes by BPA, and compared the transcriptional changes caused by chemical exposure at different salinities. There were marked transcriptional changes induced by BPA between treatments. While 533 genes were induced by a factor of more than two when O. javanicus was exposed to BPA in seawater, only 215 genes were induced in freshwater. Among those genes, only 78 were shared and changed significantly their expression in both seawater and freshwater. Those genes were mainly involved in cellular processes and signaling pathway. We then categorized by functional group genes specifically induced by BPA exposure in seawater or freshwater. Gene expression changes were further confirmed in O. javanicus exposed to various concentrations of BPA, using quantitative real-time reverse transcription PCR based on primer sets for 28 selected genes.

Indexed as

AnimalsBenzhydryl CompoundsBisphenol A CompoundsDNA, ComplementaryDNA PrimersDose-Response Relationship, DrugEnvironmental PollutantsFresh WaterGene Expression RegulationMaleOligonucleotide Array Sequence AnalysisOryziasPhenolsReverse Transcriptase Polymerase Chain ReactionSalinitySeawaterBenzhydryl Compoundsbisphenol ABisphenol A CompoundsDNA, ComplementaryDNA PrimersEnvironmental PollutantsPhenols

Identifiers

PMID24534842
PMCPMC3944526
OpenAlexW1986441924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.