Evidence map›Paper›PMID 24534729›Full record

ArticleJournal of molecular biology2014

Extracellular-regulated kinase 2 is activated by the enhancement of hinge flexibility.

Kevin M Sours, Yao Xiao, Natalie G Ahn

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Kinase Activation by Small Conformational Changes.Journal of chemical information and modeling · 2020
    Article
  10. Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Kevin M SoursDepartment of Chemistry and Biochemistry and BioFrontiers Institute, University of Colorado, Boulder, CO 80309, USA.
Yao XiaoDepartment of Chemistry and Biochemistry and BioFrontiers Institute, University of Colorado, Boulder, CO 80309, USA.
Natalie G AhnDepartment of Chemistry and Biochemistry and BioFrontiers Institute, University of Colorado, Boulder, CO 80309, USA; Howard Hughes Medical Institute, University of Colorado, Boulder, CO 80309, USA. Electronic address: natalie.ahn@colorado.edu.
University of Colorado Boulder · USHoward Hughes Medical Institute · US

Funding

Regulation of Map Kinase by Protein MotionsR01GM074134 · NIGMS · UNIVERSITY OF COLORADO · PI AHN, NATALIE G. · 2007 to 2010
$993k
ABI Elite ESI-QqTOF Mass Spectrometry SystemS10RR026641 · NCRR · UNIVERSITY OF COLORADO · PI AHN, NATALIE G. · 2010 to 2010
$458k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR026641NIGMS NIH HHS R01 GM074134NIGMS NIH HHS R01GM074134
6 · The paper itself

Abstract

Protein motions underlie conformational and entropic contributions to enzyme catalysis; however, relatively little is known about the ways in which this occurs. Studies of the mitogen-activated protein kinase ERK2 (extracellular-regulated protein kinase 2) by hydrogen-exchange mass spectrometry suggest that activation enhances backbone flexibility at the linker between N- and C-terminal domains while altering nucleotide binding mode. Here, we address the hypothesis that enhanced backbone flexibility within the hinge region facilitates kinase activation. We show that hinge mutations enhancing flexibility promote changes in the nucleotide binding mode consistent with domain movement, without requiring phosphorylation. They also lead to the activation of monophosphorylated ERK2, a form that is normally inactive. The hinge mutations bypass the need for pTyr but not pThr, suggesting that Tyr phosphorylation controls hinge motions. In agreement, monophosphorylation of pTyr enhances both hinge flexibility and nucleotide binding mode, measured by hydrogen-exchange mass spectrometry. Our findings demonstrate that regulated protein motions underlie kinase activation. Our working model is that constraints to domain movement in ERK2 are overcome by phosphorylation at pTyr, which increases hinge dynamics to promote the active conformation of the catalytic site.

Indexed as

AnimalsDNA Mutational AnalysisMass SpectrometryMitogen-Activated Protein Kinase 1Models, BiologicalModels, MolecularMutant ProteinsPhosphorylationProtein BindingProtein ConformationProtein Processing, Post-TranslationalRatsMitogen-Activated Protein Kinase 1Mutant ProteinsERK2hydrogen exchangeMAP kinasemass spectrometryprotein dynamics

Identifiers

PMID24534729
PMCPMC4001730
OpenAlexW2067885064

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.