ArticleMolecular breeding : new strategies in plant improvement2014
Diversity, genetic mapping, and signatures of domestication in the carrot (
Article in Molecular breeding : new strategies in plant improvement, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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29 citing papers in PubMed, 73 citations in OpenAlex.
- Deciphering Carotenoid and Flowering Pathway Gene Variations in Eastern and Western Carrots (Genes · 2024Article
- Health-Promoting Effects, Phytochemical Constituents and Molecular Genetic Profile of the Purple Carrot 'Purple Sun' (Nutrients · 2024Article
- Linkage mapping of root shape traits in two carrot populations.G3 (Bethesda, Md.) · 2024Article
- Advancing utilization of diverse global carrot (Frontiers in plant science · 2024Article
- Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots.Nature plants · 2023Article
- Comparative Root Transcriptome Profiling and Gene Regulatory Network Analysis between Eastern and Western Carrot (Plants (Basel, Switzerland) · 2023Article
- Genome-Wide association analysis of phenotypic traits in Bambara groundnut under drought-stressed and non-stressed conditions based on DArTseq SNP.Frontiers in plant science · 2023Article
- A trait-environment relationship approach to participatory plant breeding for organic agriculture.The New phytologist · 2022Article
- Genetic diversity structure of western-type carrots.BMC plant biology · 2021Article
- Genome-wide association analysis of Mexican bread wheat landraces for resistance to yellow and stem rust.PloS one · 2021Article
- Development of Carrot Nutraceutical Products as an Alternative Supplement for the Prevention of Nutritional Diseases.Frontiers in nutrition · 2021Article
- Mining for Candidate Genes Controlling Secondary Growth of the Carrot Storage Root.International journal of molecular sciences · 2020Article
- Genetic Structure of Wild Germplasm of Macadamia: Species Assignment, Diversity and Phylogeographic Relationships.Plants (Basel, Switzerland) · 2020Article
- Identification and mapping of a new recessive dwarfing gene dw9 on the 6RL rye chromosome and its phenotypic effects.PloS one · 2020Article
- Advances in research on the carrot, an important root vegetable in the Apiaceae family.Horticulture research · 2019Review
- Carotenoid Presence Is Associated with theGenetics · 2018Article
- Characterizing Palestinian snake melon (Cucumis melo var. flexuosus) germplasm diversity and structure using SNP and DArTseq markers.BMC plant biology · 2018Article
- Article
- Landraces of snake melon, an ancient Middle Eastern crop, reveal extensive morphological and DNA diversity for potential genetic improvement.BMC genetics · 2018Article
- Ultra-high-throughput DArTseq-based silicoDArT and SNP markers for genomic studies in macadamia.PloS one · 2018Article
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Authors and funding
12 authors at 6 institutions in 5 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Carrot is one of the most economically important vegetables worldwide, but genetic and genomic resources supporting carrot breeding remain limited. We developed a Diversity Arrays Technology (DArT) platform for wild and cultivated carrot and used it to investigate genetic diversity and to develop a saturated genetic linkage map of carrot. We analyzed a set of 900 DArT markers in a collection of plant materials comprising 94 cultivated and 65 wild carrot accessions. The accessions were attributed to three separate groups: wild, Eastern cultivated and Western cultivated. Twenty-seven markers showing signatures for selection were identified. They showed a directional shift in frequency from the wild to the cultivated, likely reflecting diversifying selection imposed in the course of domestication. A genetic linkage map constructed using 188 F2 plants comprised 431 markers with an average distance of 1.1 cM, divided into nine linkage groups. Using previously anchored single nucleotide polymorphisms, the linkage groups were physically attributed to the nine carrot chromosomes. A cluster of markers mapping to chromosome 8 showed significant segregation distortion. Two of the 27 DArT markers with signatures for selection were segregating in the mapping population and were localized on chromosomes 2 and 6. Chromosome 2 was previously shown to carry the
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.