Evidence map›Paper›PMID 24532665›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014

Protein arginine hypomethylation in a mouse model of cystathionine β-synthase deficiency.

Ruben Esse, Apolline Imbard, Cristina Florindo, Sapna Gupta, Eoin P Quinlivan, Mariska Davids, Tom Teerlink, Isabel Tavares de Almeida, Warren D Kruger, Henk J Blom and 1 more

RetractedErratum issuedAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 39 citations in OpenAlex.

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  18. Review
  19. Cystathionine β-synthase deficiency: Of mice and men.Molecular genetics and metabolism · 2017
    Review
  20. Lack of global epigenetic methylation defects in CBS deficient mice.Journal of inherited metabolic disease · 2017
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 5 countries.

Ruben EsseDepartment of Clinical Chemistry, Metabolic Unit, VU University Medical Center, Amsterdam, The Netherlands; Institute for Medicines and Pharmaceutical Sciences (iMed.UL) and.
Apolline ImbardDepartment of Clinical Chemistry, Metabolic Unit, VU University Medical Center, Amsterdam, The Netherlands; Service de Biochimie-Hormonologie, Hôpital Robert Debré, Assistance Publique-Hôpitaux de Paris (APHP), Paris, France;
Cristina FlorindoInstitute for Medicines and Pharmaceutical Sciences (iMed.UL) and.
Sapna GuptaCancer Biology Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania, USA;
Eoin P QuinlivanBiomedical Mass Spectrometry Laboratory, University of Florida, Gainesville, Florida, USA; and.
Mariska DavidsDepartment of Clinical Chemistry, Metabolic Unit, VU University Medical Center, Amsterdam, The Netherlands;
Tom TeerlinkDepartment of Clinical Chemistry, Metabolic Unit, VU University Medical Center, Amsterdam, The Netherlands;
Isabel Tavares de AlmeidaInstitute for Medicines and Pharmaceutical Sciences (iMed.UL) and Department of Biochemistry and Human Biology, Faculty of Pharmacy, University of Lisbon, Lisbon, Portugal;
Warren D KrugerCancer Biology Program, Fox Chase Cancer Center, Philadelphia, Pennsylvania, USA;
Henk J BlomDepartment of Clinical Chemistry, Metabolic Unit, VU University Medical Center, Amsterdam, The Netherlands; Laboratory for Clinical Biochemistry and Metabolism, Department of General Pediatrics, Center for Pediatrics and Adolescent Medicine, University Hospital, Freiburg, Germany henk.blom@uniklinik-freiburg.de.
Rita CastroInstitute for Medicines and Pharmaceutical Sciences (iMed.UL) and Department of Biochemistry and Human Biology, Faculty of Pharmacy, University of Lisbon, Lisbon, Portugal;
Amsterdam UMC Location VUmc · NLUniversity of Lisbon · PTFox Chase Cancer Center · USUniversity Medical Center Freiburg · DEUniversity of Florida · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
Treatment of CBS Deficiency with Proteostasis ModulatorsR01DK101404 · NIDDK · RESEARCH INST OF FOX CHASE CAN CTR · PI KRUGER, WARREN D · 2014 to 2020
$3.0M
Hyperhomocysteinemia, S-adenosylhomocysteine Accumulation, and EpigeneticsR01GM098772 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI KRUGER, WARREN D · 2012 to 2015
$1.4M
NCI NIH HHS CA06927NCI NIH HHS P30 CA006927NIDDK NIH HHS R01 DK101404NIGMS NIH HHS R01 GM098772NIGMS NIH HHS R01GM098772
6 · The paper itself

Abstract

Accumulation of the homocysteine (Hcy) precursor S-adenosylhomocysteine (AdoHcy) may cause cellular hypomethylation in the setting of hyperhomocysteinemia because of cystathionine β-synthase (CBS) deficiency, an inborn error of metabolism. To test this hypothesis, DNA and protein arginine methylation status were assessed in liver, brain, heart, and kidney obtained from a previously described mouse model of CBS deficiency. Metabolite levels in tissues and serum were determined by high-performance liquid chromatography or liquid chromatography-electrospray ionization-tandem mass spectrometry. Global DNA and protein arginine methylation status were evaluated as the contents of 5-methyldeoxycytidine in DNA and of methylarginines in proteins, respectively. In addition, histone arginine methylation was assessed by Western blotting. CBS-deficient mice exhibited increased (>6-fold) Hcy and AdoHcy levels in all tissues examined compared with control levels. In addition, global DNA methylation status was not affected, but global protein arginine methylation status was decreased (10-35%) in liver and brain. Moreover, asymmetric dimethylation of arginine 3 on histone H4 (H4R3me2a) content was markedly decreased in liver, and no differences were observed for the other histone arginine methylation marks examined. Our results show that CBS-deficient mice present severe accumulation of tissue Hcy and AdoHcy, protein arginine hypomethylation in liver and brain, and decreased H4R3me2a content in liver. Therefore, protein arginine hypomethylation arises as a potential player in the pathophysiology of CBS deficiency.

Indexed as

AnimalsArginineBrainCystathionine beta-SynthaseDisease Models, AnimalDNA MethylationHistonesHomocysteineHomocystinuriaLiverMethylationMiceS-AdenosylhomocysteineArginineCystathionine beta-SynthaseHistonesHomocysteineS-AdenosylhomocysteineH4R3me2ahomocystinuriamethylargininesS-adenosylhomocysteine

Identifiers

PMID24532665
PMCPMC4021445
OpenAlexW2119141156

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.