Evidence map›Paper›PMID 24532604›Full record

ArticlePlant physiology2014

Interaction between the GROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX families of transcription factors.

Suzanne J H Kuijt, Raffaella Greco, Adamantia Agalou, Jingxia Shao, Corine C J 't Hoen, Elin Overnäs, Michela Osnato, Serena Curiale, Donaldo Meynard, Robert van Gulik and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 1 pooled it
12.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 1 synthesis or guideline pooled it, 163 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. The WRC domain of GRF transcription factors: Structure and DNA recognition.Protein science : a publication of the Protein Society · 2025
    Article
  7. Article
  8. Article
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  12. Review
  13. Article
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  17. Article
  18. Article
  19. Article
  20. Genome-Wide Analysis of Flax (International journal of molecular sciences · 2023
    Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 4 countries.

Suzanne J H KuijtInstitute of Biology, Leiden University, Sylvius Laboratory, 2300 RA Leiden, The Netherlands.
Raffaella Greco
Adamantia Agalou
Jingxia Shao
Corine C J 't Hoen
Elin Overnäs
Michela Osnato
Serena Curiale
Donaldo Meynard
Robert van Gulik
Simone de Faria Maraschin
Mirna Atallah
Rolf J de Kam
Gerda E M Lamers
Emmanuel Guiderdoni
Laura Rossini
Annemarie H Meijer
Pieter B F Ouwerkerk
Leiden University · NLUniversity of Milan · ITCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KNOTTED1-LIKE HOMEOBOX (KNOX) genes are important regulators of meristem function, and a complex network of transcription factors ensures tight control of their expression. Here, we show that members of the GROWTH-REGULATING FACTOR (GRF) family act as players in this network. A yeast (Saccharomyces cerevisiae) one-hybrid screen with the upstream sequence of the KNOX gene Oskn2 from rice (Oryza sativa) resulted in isolation of OsGRF3 and OsGRF10. Specific binding to a region in the untranslated leader sequence of Oskn2 was confirmed by yeast and in vitro binding assays. ProOskn2:β-glucuronidase reporter expression was down-regulated by OsGRF3 and OsGRF10 in vivo, suggesting that these proteins function as transcriptional repressors. Likewise, we found that the GRF protein BGRF1 from barley (Hordeum vulgare) could act as a repressor on an intron sequence in the KNOX gene Hooded/Barley Knotted3 (Bkn3) and that AtGRF4, AtGRF5, and AtGRF6 from Arabidopsis (Arabidopsis thaliana) could repress KNOTTED-LIKE FROM ARABIDOPSIS THALIANA2 (KNAT2) promoter activity. OsGRF overexpression phenotypes in rice were consistent with aberrant meristematic activity, showing reduced formation of tillers and internodes and extensive adventitious root/shoot formation on nodes. These effects were associated with down-regulation of endogenous Oskn2 expression by OsGRF3. Conversely, RNA interference silencing of OsGRF3, OsGRF4, and OsGRF5 resulted in dwarfism, delayed growth and inflorescence formation, and up-regulation of Oskn2. These data demonstrate conserved interactions between the GRF and KNOX families of transcription factors in both monocot and dicot plants.

Indexed as

ArabidopsisDNA, PlantDown-RegulationGene Expression Regulation, PlantGene SilencingGlucuronidaseHordeumOrgan SpecificityOryzaPhenotypePlant LeavesPlant ProteinsPlant RootsPlant ShootsPromoter Regions, GeneticProtein BindingDNA, PlantGlucuronidasePlant ProteinsTranscription Factors

Identifiers

PMID24532604
PMCPMC3982755
OpenAlexW2111739512

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.