Evidence map›Paper›PMID 24532452›Full record

ArticleJournal of experimental botany2014

Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7.

Laure C David, Julie Dechorgnat, Patrick Berquin, Jean Marc Routaboul, Isabelle Debeaujon, Françoise Daniel-Vedele, Sylvie Ferrario-Méry

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Laure C DavidInstitut Jean-Pierre Bourgin (IJPB), UMR 1318 INRA-AgroParisTech, Centre de Versailles-Grignon, Route de St-Cyr (RD10), F-78026 Versailles cedex, France.
Julie Dechorgnat
Patrick Berquin
Jean Marc Routaboul
Isabelle Debeaujon
Françoise Daniel-Vedele
Sylvie Ferrario-Méry
AgroParisTech · FRInstitut National Polytechnique de Toulouse · FRWine Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NRT2.7 is a seed-specific high-affinity nitrate transporter controlling nitrate content in Arabidopsis mature seeds. The objective of this work was to analyse further the consequences of the nrt2.7 mutation for the seed metabolism. This work describes a new phenotype for the nrt2.7-2 mutant allele in the Wassilewskija accession, which exhibited a distinctive pale-brown seed coat that is usually associated with a defect in flavonoid oxidation. Indeed, this phenotype resembled those of tt10 mutant seeds defective in the laccase-like enzyme TT10/LAC15, which is involved in the oxidative polymerization of flavonoids such as the proantocyanidins (PAs) (i.e. epicatechin monomers and PA oligomers) and flavonol glycosides. nrt2.7-2 and tt10-2 mutant seeds displayed the same higher accumulation of PAs, but were partially distinct, since flavonol glycoside accumulation was not affected in the nrt2.7-2 seeds. Moreover, measurement of in situ laccase activity excluded a possibility of the nrt2.7-2 mutation affecting the TT10 enzymic activity at the early stage of seed development. Functional complementation of the nrt2.7-2 mutant by overexpression of a full-length NRT2.7 cDNA clearly demonstrated the link between the nrt2.7 mutation and the PA phenotype. However, the PA-related phenotype of nrt2.7-2 seeds was not strictly correlated to the nitrate content of seeds. No correlation was observed when nitrate was lowered in seeds due to limited nitrate nutrition of plants or to lower nitrate storage capacity in leaves of clca mutants deficient in the vacuolar anionic channel CLCa. All together, the results highlight a hitherto-unknown function of NRT2.7 in PA accumulation/oxidation.

Indexed as

Gene Expression Regulation, PlantSignal TransductionAllelesAnion Transport ProteinsArabidopsisArabidopsis ProteinsColorFlavonoidsGene ExpressionGenetic Complementation TestHomozygoteLaccaseMutationNitratesOxidation-ReductionPhenotypeAnion Transport ProteinsArabidopsis ProteinsFlavonoidsLaccaseNitratesNRT2.7 protein, ArabidopsisproanthocyanidinProanthocyanidinsTT10 protein, ArabidopsisFlavonoidslaccasenitrateNRT2.7proanthocyanidinsseedstransporterTT1.0.

Identifiers

PMID24532452
PMCPMC3924729
OpenAlexW2115446184

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.