Evidence map›Paper›PMID 24531693›Full record

ArticleCellular and molecular life sciences : CMLS2014

Chromatin composition alterations and the critical role of MeCP2 for epigenetic silencing of progesterone receptor-B gene in endometrial cancers.

Yongli Chu, Yanlin Wang, Guanghua Zhang, Haibin Chen, Sean C Dowdy, Yuning Xiong, Fengming Liu, Run Zhang, Jinping Li, Shi-Wen Jiang

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 8 institutions in 2 countries.

Yongli ChuYantai Yuhuangding Hospital Affiliated to Qingdao University, Yantai, 264000, China.
Yanlin Wang
Guanghua Zhang
Haibin Chen
Sean C Dowdy
Yuning Xiong
Fengming Liu
Run Zhang
Jinping Li
Shi-Wen Jiang
Mayo Clinic in Arizona · USBinzhou University · CNGuangxi Medicinal Botanical Garden · CNMemorial Health University Medical Center · USMercer University · USQingdao University · CNShantou University · CNTianjin Medical University Cancer Institute and Hospital · CN

Funding

Transcription Enhancer Factor Control of Placental GenesR01HD041577 · NICHD · MERCER UNIVERSITY MACON · PI JIANG, SHI-WEN · 2003 to 2007
$1.3M
NICHD NIH HHS R01 HD041577NICHD NIH HHS R01 HD 41577
6 · The paper itself

Abstract

objectiveTo understand the epigenetic mechanism underlying the PR-B gene silencing in endometrial cancer (EC) cells, we compared the chromatin composition between transcriptionally active and silenced PR-B genes in EC cell lines and cancer tissues.

methodsChromatin Immunoprecipitation (ChIP) assay was performed to measure MBD occupancy and histone acetylation/methylation in transcriptionally active and silenced PR-B genes. PR-B-positive/-negative, as well as epigenetic inhibitor-treated/-untreated EC cells were used as study models. Real-time polymerase chain reaction (PCR) and Western blot analysis were applied to measure the mRNA and protein levels of PR-B, MBD, and histones.

resultsA close association among PR-B methylation, MBD binding and PR-B gene silencing was observed. Treatment with epigenetic inhibitors led to dynamic changes in the PR-B chromatin composition and gene expression. Increased H3/H4 acetylation and H3-K4 methylation, and decreased H3-K9 methylation were found to be associated with re-activation of silenced PR-B genes. MeCP2 knockdown resulted in a decreased MeCP2 binding to PR-B genes and an increased PR-B expression. ChIP analysis of MeCP2 binding to PR-B genes in the PR-B-positive/-negative EC samples confirmed the significant role of MeCP2 in PR-B silencing.

conclusionPR-B gene expression is regulated by a concerted action of epigenetic factors including DNA methylation, MBD binding, and histone modifications. MeCP2 occupancy of PR-B genes plays a critical role in PR-B gene silencing. These findings enriched our knowledge of the epigenetic regulation of PR-B expression in EC, and suggested that the epigenetic re-activation of PR-B could be explored as a potential strategy to sensitize the PR-B-negative endometrial cancers to progestational therapy.

Indexed as

Gene Expression Regulation, NeoplasticGene SilencingAdenocarcinomaAzacitidineCell Line, TumorChromatin ImmunoprecipitationCpG IslandsDNA-Binding ProteinsDNA MethylationEndometrial NeoplasmsFemaleHistone Deacetylase InhibitorsHistonesHumansHydroxamic AcidsMethyl-CpG-Binding Protein 2AzacitidineDNA-Binding ProteinsHistone Deacetylase InhibitorsHistonesHydroxamic AcidsMBD1 protein, humanMECP2 protein, humanMethyl-CpG-Binding Protein 2Neoplasm Proteinsprogesterone receptor BReceptors, ProgesteroneRNA, MessengerRNA, NeoplasmRNA, Small InterferingTranscription Factorstrichostatin A

Identifiers

PMID24531693
PMCPMC11113436
OpenAlexW2061411227

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.