Evidence map›Paper›PMID 24530865›Full record

ArticleBiochimica et biophysica acta2014

Integration of energy and electron transfer processes in the photosynthetic membrane of Rhodobacter sphaeroides.

Michaël L Cartron, John D Olsen, Melih Sener, Philip J Jackson, Amanda A Brindley, Pu Qian, Mark J Dickman, Graham J Leggett, Klaus Schulten, C Neil Hunter

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 115 citations in OpenAlex.

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  4. Review
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  7. A Novel Pathway of Functional microRNA Uptake and Mitochondria Delivery.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
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  10. Cryo-EM structure of the four-subunitProceedings of the National Academy of Sciences of the United States of America · 2023
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  12. Light energy transduction in liposome-based artificial cells.Frontiers in bioengineering and biotechnology · 2023
    Review
  13. Article
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  18. Cryo-EM Structure of theBiochemistry · 2021
    Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Michaël L CartronDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK.
John D OlsenDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK.
Melih SenerBeckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA; Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Philip J JacksonDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK; ChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Mappin Street, Sheffield S1 3JD, UK.
Amanda A BrindleyDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK.
Pu QianDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK.
Mark J DickmanChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Mappin Street, Sheffield S1 3JD, UK.
Graham J LeggettDepartment of Chemistry, University of Sheffield, Brook Hill, Sheffield S3 7HF, UK.
Klaus SchultenBeckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA; Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
C Neil HunterDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, UK. Electronic address: c.n.hunter@sheffield.ac.uk.
University of Sheffield · GBUniversity of Illinois Urbana-Champaign · US

Funding

WHOLE CELL SIMULATIONP41GM104601 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI TAJKHORSHID, EMAD · 2012 to 2021
$19.0M
Biotechnology and Biological Sciences Research Council BB/G021546/1NIGMS NIH HHS 9P41GM104601NIGMS NIH HHS P41 GM104601
6 · The paper itself

Abstract

Photosynthesis converts absorbed solar energy to a protonmotive force, which drives ATP synthesis. The membrane network of chlorophyll-protein complexes responsible for light absorption, photochemistry and quinol (QH2) production has been mapped in the purple phototrophic bacterium Rhodobacter (Rba.) sphaeroides using atomic force microscopy (AFM), but the membrane location of the cytochrome bc1 (cytbc1) complexes that oxidise QH2 to quinone (Q) to generate a protonmotive force is unknown. We labelled cytbc1 complexes with gold nanobeads, each attached by a Histidine10 (His10)-tag to the C-terminus of cytc1. Electron microscopy (EM) of negatively stained chromatophore vesicles showed that the majority of the cytbc1 complexes occur as dimers in the membrane. The cytbc1 complexes appeared to be adjacent to reaction centre light-harvesting 1-PufX (RC-LH1-PufX) complexes, consistent with AFM topographs of a gold-labelled membrane. His-tagged cytbc1 complexes were retrieved from chromatophores partially solubilised by detergent; RC-LH1-PufX complexes tended to co-purify with cytbc1 whereas LH2 complexes became detached, consistent with clusters of cytbc1 complexes close to RC-LH1-PufX arrays, but not with a fixed, stoichiometric cytbc1-RC-LH1-PufX supercomplex. This information was combined with a quantitative mass spectrometry (MS) analysis of the RC, cytbc1, ATP synthase, cytaa3 and cytcbb3 membrane protein complexes, to construct an atomic-level model of a chromatophore vesicle comprising 67 LH2 complexes, 11 LH1-RC-PufX dimers & 2 RC-LH1-PufX monomers, 4 cytbc1 dimers and 2 ATP synthases. Simulation of the interconnected energy, electron and proton transfer processes showed a half-maximal ATP turnover rate for a light intensity equivalent to only 1% of bright sunlight. Thus, the photosystem architecture of the chromatophore is optimised for growth at low light intensities.

Indexed as

Electron TransportPhotosynthesisBase SequenceDNA PrimersMass SpectrometryMicroscopy, Atomic ForceModels, MolecularRhodobacter sphaeroidesSpectrophotometry, UltravioletDNA PrimersAtomic force microscopyBacterial photosynthesisCytochrome bc(1)Electron microscopyMembrane modellingQuinone

Identifiers

PMID24530865
PMCPMC4143486
OpenAlexW2004797022

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.