Evidence map›Paper›PMID 24530226›Full record

ArticleBioorganic & medicinal chemistry2014

Novel compounds lowering the cellular isoform of the human prion protein in cultured human cells.

B Michael Silber, Joel R Gever, Satish Rao, Zhe Li, Adam R Renslo, Kartika Widjaja, Casper Wong, Kurt Giles, Yevgeniy Freyman, Manuel Elepano and 3 more

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Prion protein quantification in human cerebrospinal fluid as a tool for prion disease drug development.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. Article
  11. Developing Therapeutics for PrP Prion Diseases.Cold Spring Harbor perspectives in medicine · 2017
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

B Michael SilberInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, United States.
Joel R GeverInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States.
Satish RaoInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States.
Zhe LiInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States.
Adam R RensloSmall Molecule Discovery Center, University of California, San Francisco, United States; Department of Pharmaceutical Chemistry, University of California, San Francisco, United States.
Kartika WidjajaInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States.
Casper WongInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States.
Kurt GilesInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States.
Yevgeniy FreymanInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States.
Manuel ElepanoInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States.
John J IrwinDepartment of Pharmaceutical Chemistry, University of California, San Francisco, United States.
Matthew P JacobsonInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Pharmaceutical Chemistry, University of California, San Francisco, United States.
Stanley B PrusinerInstitute for Neurodegenerative Diseases, University of California, San Francisco, United States; Department of Neurology, University of California, San Francisco, United States. Electronic address: stanley@ind.ucsf.edu.
University of California, San Francisco · USInstitute for Neurodegenerative Disorders · US

Funding

VIRAL DEGENERATIVE DEMENTING DISEASE IN AGING (SUPP)P01AG002132 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SALI, ANDREJ · 1985 to 2024
$51.7M
UNDERSTANDING AND IMPROVING SMALL MOLECULE INHIBITORS OF PRION REPLICATIONP01AG021601 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PRUSINER, STANLEY B · 2003 to 2013
$31.9M
SYNTHETIC AND RECOMBINANT PRP PEPTIDES AND PROTEINSP01AG010770 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PRUSINER, STANLEY B · 1993 to 2015
$30.3M
Towards Therapeutics for Neurodegenerative DiseasesR37AG031220 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PRUSINER, STANLEY B · 2008 to 2017
$6.2M
NIA NIH HHS AG002132NIA NIH HHS AG010770NIA NIH HHS AG021601NIA NIH HHS AG031220NIA NIH HHS P01 AG002132NIA NIH HHS P01 AG010770NIA NIH HHS P01 AG021601NIA NIH HHS R37 AG031220
6 · The paper itself

Abstract

purposePrevious studies showed that lowering PrP(C) concomitantly reduced PrP(Sc) in the brains of mice inoculated with prions. We aimed to develop assays that measure PrP(C) on the surface of human T98G glioblastoma and IMR32 neuroblastoma cells. Using these assays, we sought to identify chemical hits, confirmed hits, and scaffolds that potently lowered PrP(C) levels in human brains cells, without lethality, and that could achieve drug concentrations in the brain after oral or intraperitoneal dosing in mice.

methodsWe utilized HTS ELISA assays to identify small molecules that lower PrP(C) levels by ≥30% on the cell surface of human glioblastoma (T98G) and neuroblastoma (IMR32) cells.

resultsFrom 44,578 diverse chemical compounds tested, 138 hits were identified by single point confirmation (SPC) representing 7 chemical scaffolds in T98G cells, and 114 SPC hits representing 6 scaffolds found in IMR32 cells. When the confirmed SPC hits were combined with structurally related analogs, >300 compounds (representing 6 distinct chemical scaffolds) were tested for dose-response (EC₅₀) in both cell lines, only studies in T98G cells identified compounds that reduced PrP(C) without killing the cells. EC₅₀ values from 32 hits ranged from 65 nM to 4.1 μM. Twenty-eight were evaluated in vivo in pharmacokinetic studies after a single 10 mg/kg oral or intraperitoneal dose in mice. Our results showed brain concentrations as high as 16.2 μM, but only after intraperitoneal dosing.

conclusionsOur studies identified leads for future studies to determine which compounds might lower PrP(C) levels in rodent brain, and provide the basis of a therapeutic for fatal disorders caused by PrP prions.

Indexed as

AnimalsBrainCell SurvivalDose-Response Relationship, DrugFluorescenceHigh-Throughput Screening AssaysHumansMiceMicroscopy, ConfocalMolecular StructurePrionsProtein IsoformsSmall Molecule LibrariesStructure-Activity RelationshipSurface PropertiesTissue DistributionPrionsProtein IsoformsSmall Molecule LibrariesCreutzfeldt–Jakob diseaseNeurodegenerationPrionPrP(C)PrP(Sc)

Identifiers

PMID24530226
PMCPMC3984052
OpenAlexW1984621852

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.