Evidence map›Paper›PMID 24529438›Full record

ArticleMethods in enzymology2014

Application of activity-based protein profiling to study enzyme function in adipocytes.

Andrea Galmozzi, Eduardo Dominguez, Benjamin F Cravatt, Enrique Saez

Abstract read
In one paragraph

Article in Methods in enzymology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
57.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Activity-based protein profiling: A graphical review.Current research in pharmacology and drug discovery · 2023
    Review
  7. Article
  8. Review
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Andrea GalmozziDepartment of Chemical Physiology, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.
Eduardo DominguezDepartment of Chemical Physiology, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.
Benjamin F CravattDepartment of Chemical Physiology, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA.
Enrique SaezDepartment of Chemical Physiology, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA. Electronic address: esaez@scripps.edu.
Scripps Research Institute · US

Funding

Identification and Therapeutic Valiation of Adipocyte Serine Hydrolases of MetabR24DK099810 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI CRAVATT, BENJAMIN F, SAEZ, ENRIQUE · 2013 to 2016
$4.7M
Targeting Adipocyte Lipases to Treat Pancreatic Cancer-Associated CachexiaR21CA179489 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI SAEZ, ENRIQUE · 2013 to 2014
$447k
NCI NIH HHS R21 CA179489NIDDK NIH HHS R24 DK099810
6 · The paper itself

Abstract

Activity-based protein profiling (ABPP) is a chemical proteomics approach that utilizes small-molecule probes to determine the functional state of enzymes directly in native systems. ABPP probes selectively label active enzymes, but not their inactive forms, facilitating the characterization of changes in enzyme activity that occur without alterations in protein levels. ABPP can be a tool superior to conventional gene expression and proteomic profiling methods to discover new enzymes active in adipocytes and to detect differences in the activity of characterized enzymes that may be associated with disorders of adipose tissue function. ABPP probes have been developed that react selectively with most members of specific enzyme classes. Here, using as an example the serine hydrolase family that includes many enzymes with critical roles in adipocyte physiology, we describe methods to apply ABPP analysis to the study of adipocyte enzymatic pathways.

Indexed as

AdipocytesAnimalsEnzyme AssaysHumansMolecular Probe TechniquesProteomeProteomicsSerine ProteasesProteomeSerine ProteasesABPP probesActivity-based protein profilingAdipocyte enzymesChemoproteomics methodsEnzyme activityFunctional proteomicsSerine hydrolases

Identifiers

PMID24529438
PMCPMC4138146
OpenAlexW109269349

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.