Evidence map›Paper›PMID 24528677›Full record

ArticleBMC biology2014

Pax6 regulates the formation of the habenular nuclei by controlling the temporospatial expression of Shh in the diencephalon in vertebrates.

Mallika Chatterjee, Qiuxia Guo, Sabrina Weber, Steffen Scholpp, James Yh Li

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Developmental Requirement of Homeoprotein Otx2 for Specific Habenulo-Interpeduncular Subcircuits.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  7. Development and connectivity of the habenular nuclei.Seminars in cell & developmental biology · 2018
    Review
  8. Review
  9. Article
  10. Article
  11. Diencephalic Size Is Restricted by a Novel Interplay Between GCN5 Acetyltransferase Activity and Retinoic Acid Signaling.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Mallika Chatterjee
Qiuxia Guo
Sabrina Weber
Steffen ScholppDepartment of Genetics and Developmental Biology, University of Connecticut Health Center, 400 Farmington Avenue, Farmington, CT, 06030-6403, USA. steffen.scholpp@kit.edu.
James Yh Li
Karlsruhe Institute of Technology · DEUConn Health · USTata Institute of Fundamental Research · IN

Funding

Molecular mechanisms of differentiation of habenular and thalamic neuronsR01MH094914 · NIMH · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LI, JAMES Y.H · 2012 to 2016
$1.9M
The Role of Alternative Splicing of Fgf8 in Mouse DevelopmentR01HD050474 · NICHD · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI LI, JAMES Y.H · 2007 to 2011
$1.6M
NICHD NIH HHS R01HD050474NIMH NIH HHS R01 MH094914
6 · The paper itself

Abstract

backgroundThe habenula and the thalamus are two critical nodes in the forebrain circuitry and they connect the midbrain and the cerebral cortex in vertebrates. The habenula is derived from the epithalamus and rests dorsally to the thalamus. Both epithalamus and thalamus arise from a single diencephalon segment called prosomere (p)2. Shh is expressed in the ventral midline of the neural tube and in the mid-diencephalic organizer (MDO) at the zona limitans intrathalamica between thalamus and prethalamus. Acting as a morphogen, Shh plays an important role in regulating cell proliferation and survival in the diencephalon and thalamic patterning. The molecular regulation of the MDO Shh expression and the potential role of Shh in development of the habenula remain largely unclear.

resultsWe show that deleting paired-box and homeobox-containing gene Pax6 results in precocious and expanded expression of Shh in the prospective MDO in fish and mice, whereas gain-of-function of pax6 inhibits MDO shh expression in fish. Using gene expression and genetic fate mapping, we have characterized the expression of molecular markers that demarcate the progenitors and precursors of habenular neurons. We show that the thalamic domain is shifted dorsally and the epithalamus is missing in the alar plate of p2 in the Pax6 mutant mouse. Conversely, the epithalamus is expanded ventrally at the expense of the thalamus in mouse embryos with reduced Shh activity. Significantly, attenuating Shh signaling largely rescues the patterning of p2 and restores the epithalamus in Pax6 mouse mutants, suggesting that Shh acts downstream of Pax6 in controlling the formation of the habenula. Similar to that found in the mouse, we show that pax6 controls the formation of the epithalamus mostly via the regulation of MDO shh expression in zebrafish.

conclusionsOur findings demonstrate that Pax6 has an evolutionarily conserved function in establishing the temporospatial expression of Shh in the MDO in vertebrates. Furthermore, Shh mediates Pax6 function in regulating the partition of the p2 domain into the epithalamus and thalamus.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBiomarkersBody PatterningEmbryo, MammalianEmbryo, NonmammalianEye ProteinsHabenulaHedgehog ProteinsHomeodomain ProteinsMiceOrganizers, EmbryonicPaired Box Transcription FactorsPAX6 Transcription FactorProtein BindingRepressor ProteinsBiomarkersEye ProteinsHedgehog ProteinsHomeodomain Proteinsirx1b protein, zebrafishPaired Box Transcription FactorsPax6 protein, mousePAX6 Transcription FactorRepressor ProteinsShha protein, zebrafishShh protein, mouseTranscription FactorsZebrafish Proteins

Identifiers

PMID24528677
PMCPMC3996077
OpenAlexW2008280125

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.