Evidence map›Paper›PMID 24527392›Full record

ArticleStem cell reports2014

Conserved two-step regulatory mechanism of human epithelial differentiation.

Jayant K Rane, Alastair P Droop, Davide Pellacani, Euan S Polson, Matthew S Simms, Anne T Collins, Leo S D Caves, Norman J Maitland

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

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  13. Targeting phenotypic heterogeneity in benign prostatic hyperplasia.Differentiation; research in biological diversity
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jayant K RaneYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Alastair P DroopYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK ; York Centre for Complex Systems Analysis and Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Davide PellacaniYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Euan S PolsonYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Matthew S SimmsDepartment of Urology, Castle Hill Hospital, Cottingham, Humberside HU16 5JQ, UK ; Hull York Medical School, University of Hull, Hull, Humberside HU6 7RX, UK.
Anne T CollinsYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Leo S D CavesYork Centre for Complex Systems Analysis and Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
Norman J MaitlandYCR Cancer Research Unit, Department of Biology, University of York, York, North Yorkshire YO10 5DD, UK.
University of York · GBYorkshire Cancer Research · GBCastle Hill Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human epithelia are organized in a hierarchical structure, where stem cells generate terminally differentiated cells via intermediate progenitors. This two-step differentiation process is conserved in all tissues, but it is not known whether a common gene set contributes to its regulation. Here, we show that retinoic acid (RA) regulates early human prostate epithelial differentiation by activating a tightly coexpressed set of 80 genes (e.g., TMPRSS2). Response kinetics suggested that some of these genes could be direct RA targets, whereas others are probably responding indirectly to RA stimulation. Comparative bioinformatic analyses of published tissue-specific microarrays and a large-scale transcriptomic data set revealed that these 80 genes are not only RA responsive but also significantly coexpressed in many human cell systems. The same gene set preferentially responds to androgens during terminal prostate epithelial differentiation, implying a cell-type-dependent interplay between RA and tissue-specific transcription factor-mediated signaling in regulating the two steps of epithelial differentiation.

Indexed as

Cell DifferentiationAndrogensBiomarkersEpithelial CellsEpitheliumGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansMaleOrgan SpecificityProstateStem CellsTretinoinAndrogensBiomarkersTretinoin

Identifiers

PMID24527392
PMCPMC3923223
OpenAlexW2059203931

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.