Evidence map›Paper›PMID 24525708›Full record

ArticleNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2014

Genetic association analysis of 300 genes identifies a risk haplotype in SLC18A2 for post-traumatic stress disorder in two independent samples.

Nadia Solovieff, Andrea L Roberts, Andrew Ratanatharathorn, Michelle Haloosim, Immaculata De Vivo, Anthony P King, Israel Liberzon, Allison Aiello, Monica Uddin, Derek E Wildman and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 3 pooled it
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 3 syntheses or guidelines pooled it, 55 citations in OpenAlex.

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  16. Polygenic risk score: use in migraine research.The journal of headache and pain · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Nadia Solovieff1] Department of Center of Human Genetics Research, Massachusetts General Hospital, Boston, MA, USA [2] Department of Stanley Center for Psychiatric Research, the Broad Institute of Harvard and MIT, Cambridge, MA, USA [3] Department of Psychiatry, Harvard Medical School, Boston, MA, USA.
Andrea L RobertsDepartment of Society, Human Development and Health, Harvard School of Public Health, Boston, MA, USA.
Andrew RatanatharathornDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Michelle HaloosimDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Immaculata De Vivo1] Department of Epidemiology, Harvard School of Public Health, Boston, MA, USA [2] Channing Division of Network Medicine, BWH, Harvard Medical School, Boston, MA, USA.
Anthony P KingMental Health Service, VA Ann Arbor Health Systems, MI, USA.
Israel Liberzon1] Mental Health Service, VA Ann Arbor Health Systems, MI, USA [2] Department of Psychiatry, University of Michigan Medical School, Ann Arbor, MI, USA.
Allison AielloDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, MI, USA.
Monica Uddin1] Center for Molecular Medicine and Genetics, Department of Psychiatry & Behavioral Neurosciences, Wayne State University School of Medicine, Detroit, MI, USA [2] Department of Psychiatry and Behavioral Neurosciences, Wayne State University School of Medicine, Detroit, MI, USA.
Derek E Wildman1] Center for Molecular Medicine and Genetics, Department of Psychiatry & Behavioral Neurosciences, Wayne State University School of Medicine, Detroit, MI, USA [2] Department of Obstetrics and Gynecology, Wayne State University School of Medicine, Detroit, MI, USA.
Sandro GaleaDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Jordan W Smoller1] Department of Center of Human Genetics Research, Massachusetts General Hospital, Boston, MA, USA [2] Department of Stanley Center for Psychiatric Research, the Broad Institute of Harvard and MIT, Cambridge, MA, USA [3] Department of Psychiatry, Harvard Medical School, Boston, MA, USA.
Shaun M Purcell1] Department of Center of Human Genetics Research, Massachusetts General Hospital, Boston, MA, USA [2] Department of Stanley Center for Psychiatric Research, the Broad Institute of Harvard and MIT, Cambridge, MA, USA [3] Department of Psychiatry, Harvard Medical School, Boston, MA, USA [4] Division of Psychiatric Genomics, Mount Sinai School of Medicine, New York, NY, USA.
Karestan C KoenenDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Columbia University · USHarvard University · USVA Ann Arbor Healthcare System · USWayne State University · USMassachusetts General Hospital · USUniversity of Michigan–Ann Arbor · US

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI RENGARAJAN, JYOTHI · 1985 to 2011
$114.0M
Ecologic Stressors, PTSD, and Drug Use in DetroitR01DA022720 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2007 to 2011
$4.7M
Genetic Determinants of PTSD in WomenR01MH078928 · NIMH · HARVARD SCHOOL OF PUBLIC HEALTH · PI KOENEN, KARESTAN C · 2007 to 2010
$2.9M
The Cross-National Epidemiology of Trauma Exposure and PTSDR01MH093612 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KOENEN, KARESTAN C · 2011 to 2013
$2.0M
Using GWAS Data for Enhanced Mendelian Randomization StudiesRC4MH092707 · NIMH · HARVARD SCHOOL OF PUBLIC HEALTH · PI KUBZANSKY, LAURA D · 2010 to 2010
$1.5M
Candidate Epigenetic Biomarkers For PTSD: Insights From DetroitRC1MH088283 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AIELLO, ALLISON E · 2009 to 2010
$995k
Research and Mentoring on Integrating Psychiatric Genetics and NeuroscienceK24MH094614 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI SMOLLER, JORDAN W · 2012 to 2016
$925k
NCRR NIH HHS P51 RR000165NCRR NIH HHS P51RR000165NIDA NIH HHS DA022720NIDA NIH HHS DA 022720-S1NIDA NIH HHS R01 DA022720NIMH NIH HHS K24 MH094614NIMH NIH HHS MH078928NIMH NIH HHS MH088283NIMH NIH HHS R01 MH078928NIMH NIH HHS R01 MH093612NIMH NIH HHS RC1 MH088283NIMH NIH HHS RC4 MH092707NIMH NIH HHS RC4MH092707
6 · The paper itself

Abstract

The genetic architecture of post-traumatic stress disorder (PTSD) remains poorly understood with the vast majority of genetic association studies reporting on single candidate genes. We conducted a large genetic study in trauma-exposed European-American women (N=2538; 845 PTSD cases, 1693 controls) by testing 3742 SNPs across more than 300 genes and conducting polygenic analyses using results from the Psychiatric Genome-Wide Association Studies Consortium (PGC). We tested the association between each SNP and two measures of PTSD, a severity score and diagnosis. We found a significant association between PTSD (diagnosis) and SNPs (top SNP: rs363276, odds ratio (OR)=1.4, p=2.1E-05) in SLC18A2 (vesicular monoamine transporter 2). A haplotype analysis of 9 SNPs in SLC18A2, including rs363276, identified a risk haplotype (CGGCGGAAG, p=0.0046), and the same risk haplotype was associated with PTSD in an independent cohort of trauma-exposed African-Americans (p=0.049; N=748, men and women). SLC18A2 is involved in transporting monoamines to synaptic vesicles and has been implicated in a number of neuropsychiatric disorders including major depression. Eight genes previously associated with PTSD had SNPs with nominally significant associations (p<0.05). The polygenic analyses suggested that there are SNPs in common between PTSD severity and bipolar disorder. Our data are consistent with a genetic architecture for PTSD that is highly polygenic, influenced by numerous SNPs with weak effects, and may overlap with mood disorders. Genome-wide studies with very large samples sizes are needed to detect these types of effects.

Indexed as

HaplotypesPolymorphism, Single NucleotideFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansMiddle AgedRisk FactorsStress Disorders, Post-TraumaticVesicular Monoamine Transport ProteinsSLC18A2 protein, humanVesicular Monoamine Transport Proteins

Identifiers

PMID24525708
PMCPMC4059895
OpenAlexW2049786703

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.