Evidence map›Paper›PMID 24523502›Full record

ArticleJournal of experimental botany2014

The essential role of sugar metabolism in the acclimation response of Arabidopsis thaliana to high light intensities.

Jessica Schmitz, Luisa Heinrichs, Federico Scossa, Alisdair R Fernie, Marie-Luise Oelze, Karl-Josef Dietz, Maxi Rothbart, Bernhard Grimm, Ulf-Ingo Flügge, Rainer E Häusler

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 71 citations in OpenAlex.

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  11. What signals the glyoxalase pathway in plants?Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jessica SchmitzDepartment of Botany II, Cologne Biocenter, University of Cologne, Zülpicher Straße 47b, D-50674 Cologne, Germany.
Luisa Heinrichs
Federico Scossa
Alisdair R Fernie
Marie-Luise Oelze
Karl-Josef Dietz
Maxi Rothbart
Bernhard Grimm
Ulf-Ingo Flügge
Rainer E Häusler
University of Cologne · DEBielefeld University · DEHumboldt-Universität zu Berlin · DEMax Planck Society · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retrograde signals from chloroplasts are thought to control the expression of nuclear genes associated with plastidial processes such as acclimation to varying light conditions. Arabidopsis mutants altered in the day and night path of photoassimilate export from the chloroplasts served as tools to study the involvement of carbohydrates in high light (HL) acclimation. A double mutant impaired in the triose phosphate/phosphate translocator (TPT) and ADP-glucose pyrophosphorylase (AGPase) (adg1-1/tpt-2) exhibits a HL-dependent depletion in endogenous carbohydrates combined with a severe growth and photosynthesis phenotype. The acclimation response of mutant and wild-type plants has been assessed in time series after transfer from low light (LL) to HL by analysing photosynthetic performance, carbohydrates, MgProtoIX (a chlorophyll precursor), and the ascorbate/glutathione redox system, combined with microarray-based transcriptomic and GC-MS-based metabolomic approaches. The data indicate that the accumulation of soluble carbohydrates (predominantly glucose) acts as a short-term response to HL exposure in both mutant and wild-type plants. Only if carbohydrates are depleted in the long term (e.g. after 2 d) is the acclimation response impaired, as observed in the adg1-1/tpt-2 double mutant. Furthermore, meta-analyses conducted with in-house and publicly available microarray data suggest that, in the long term, reactive oxygen species such as H₂O₂ can replace carbohydrates as signals. Moreover, a cross-talk exists between genes associated with the regulation of starch and lipid metabolism. The involvement of genes responding to phytohormones in HL acclimation appears to be less likely. Various candidate genes involved in retrograde control of nuclear gene expression emerged from the analyses of global gene expression.

Indexed as

AcclimatizationGene Expression Regulation, PlantSignal TransductionArabidopsisBiological TransportCarbohydrate MetabolismCarbonChloroplastsDown-RegulationGene Expression ProfilingGlucoseLightMetabolomicsMutationOligonucleotide Array Sequence AnalysisPhotosynthesisCarbonGlucoseReactive Oxygen SpeciesArabidopsis mutantscarbon partitioninglight acclimationmetabolomicsphotosynthesisretrograde signallingsugar metabolismtranscriptomics.

Identifiers

PMID24523502
PMCPMC3967092
OpenAlexW2096144164

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.