Evidence map›Paper›PMID 24523285›Full record

ArticleMolecular biology of the cell2014

The signaling lipid PI(3,5)P₂ stabilizes V₁-V(o) sector interactions and activates the V-ATPase.

Sheena Claire Li, Theodore T Diakov, Tao Xu, Maureen Tarsio, Wandi Zhu, Sergio Couoh-Cardel, Lois S Weisman, Patricia M Kane

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Subcellular Cartography of the Phosphoinositide Multiverse.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2026
    Review
  6. Article
  7. Lysosomal swelling triggers LRRK2 activity.bioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. ATG16L1 controls mammalian vacuolar proton ATPase.The Journal of cell biology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. PIPNature communications · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Phospholipids Differentially Regulate CaACS chemical biology · 2024
    Article
  18. Article
  19. DEAD-Box RNA Helicase Family in Physic Nut (Plants (Basel, Switzerland) · 2024
    Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sheena Claire LiDepartment of Biochemistry and Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13219 Life Sciences Institute and Department of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor MI 48109.
Theodore T Diakov
Tao Xu
Maureen Tarsio
Wandi Zhu
Sergio Couoh-Cardel
Lois S Weisman
Patricia M Kane
SUNY Upstate Medical University · USUniversity of Michigan · US

Funding

MOLECULAR BASIS OF ORGANELLE DIVISION AND SEGREGATIONR01GM050403 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WEISMAN, LOIS S · 1994 to 2015
$5.7M
SUBUNIT STRUCTURE/FUNCTION IN VACUOLAR H+ ATPASESR01GM050322 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI KANE, PATRICIA M · 1994 to 2015
$4.1M
NIGMS NIH HHS R01 GM050322NIGMS NIH HHS R01 GM050403NIGMS NIH HHS R01-GM050403NIGMS NIH HHS R01 GM50322
6 · The paper itself

Abstract

Vacuolar proton-translocating ATPases (V-ATPases) are highly conserved, ATP-driven proton pumps regulated by reversible dissociation of its cytosolic, peripheral V1 domain from the integral membrane V(o) domain. Multiple stresses induce changes in V1-V(o) assembly, but the signaling mechanisms behind these changes are not understood. Here we show that certain stress-responsive changes in V-ATPase activity and assembly require the signaling lipid phosphatidylinositol 3,5-bisphosphate (PI(3,5)P2). V-ATPase activation through V1-V(o) assembly in response to salt stress is strongly dependent on PI(3,5)P2 synthesis. Purified V(o) complexes preferentially bind to PI(3,5)P2 on lipid arrays, suggesting direct binding between the lipid and the membrane sector of the V-ATPase. Increasing PI(3,5)P2 levels in vivo recruits the N-terminal domain of V(o)-sector subunit Vph1p from cytosol to membranes, independent of other subunits. This Vph1p domain is critical for V1-V(o) interaction, suggesting that interaction of Vph1p with PI(3,5)P2-containing membranes stabilizes V1-V(o) assembly and thus increases V-ATPase activity. These results help explain the previously described vacuolar acidification defect in yeast fab1 and vac14 mutants and suggest that human disease phenotypes associated with PI(3,5)P2 loss may arise from compromised V-ATPase stability and regulation.

Indexed as

Membrane ProteinsOsmotic PressurePhosphatidylinositol PhosphatesPhosphotransferases (Alcohol Group Acceptor)Protein Structure, TertiarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSodium ChlorideVacuolar Proton-Translocating ATPasesFAB1 protein, S cerevisiaeMembrane Proteinsphosphatidylinositol 3,5-diphosphatePhosphatidylinositol PhosphatesPhosphotransferases (Alcohol Group Acceptor)Saccharomyces cerevisiae ProteinsSodium ChlorideVAC14 protein, S cerevisiaeVacuolar Proton-Translocating ATPases

Identifiers

PMID24523285
PMCPMC3982991
OpenAlexW2135120386

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.