Evidence map›Paper›PMID 24521420›Full record

ArticleBiometrics2014

Regression for skewed biomarker outcomes subject to pooling.

Emily M Mitchell, Robert H Lyles, Amita K Manatunga, Michelle Danaher, Neil J Perkins, Enrique F Schisterman

Abstract read
In one paragraph

Article in Biometrics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Additive partially linear model for pooled biomonitoring data.Computational statistics & data analysis · 2024
    Article
  2. Article
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  7. Local polynomial regression for pooled response data.Journal of nonparametric statistics · 2020
    Article
  8. Article
  9. Article
  10. Group testing case identification with biomarker information.Computational statistics & data analysis · 2018
    Article
  11. Article
  12. Article
  13. Article
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  15. Article
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  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Emily M MitchellDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia 30322, U.S.A.
Robert H Lyles
Amita K Manatunga
Michelle Danaher
Neil J Perkins
Enrique F Schisterman

Funding

Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
ROC Curve MethodologyZIAHD008761 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI SCHISTERMAN, ENRIQUE F. · 2009 to 2021
$2.1M
Analytic Methods:Enviornmental/Reproductive EpidemiologyR01ES012458 · NIEHS · EMORY UNIVERSITY · PI LYLES, ROBERT H, MANATUNGA, AMITA K. · 2003 to 2011
$1.8M
Accessible Handling of Misclassified or Missing Binary Variables in CER StudiesRC4NR012527 · NINR · EMORY UNIVERSITY · PI LYLES, ROBERT H · 2010 to 2010
$442k
NCATS NIH HHS UL1 TR000454NCATS NIH HHS UL1TR-000454NIEHS NIH HHS 5R01ES012458-07NIEHS NIH HHS R01 ES012458NINR NIH HHS 1RC4NR012527-01NINR NIH HHS RC4 NR012527
6 · The paper itself

Abstract

Epidemiological studies involving biomarkers are often hindered by prohibitively expensive laboratory tests. Strategically pooling specimens prior to performing these lab assays has been shown to effectively reduce cost with minimal information loss in a logistic regression setting. When the goal is to perform regression with a continuous biomarker as the outcome, regression analysis of pooled specimens may not be straightforward, particularly if the outcome is right-skewed. In such cases, we demonstrate that a slight modification of a standard multiple linear regression model for poolwise data can provide valid and precise coefficient estimates when pools are formed by combining biospecimens from subjects with identical covariate values. When these x-homogeneous pools cannot be formed, we propose a Monte Carlo expectation maximization (MCEM) algorithm to compute maximum likelihood estimates (MLEs). Simulation studies demonstrate that these analytical methods provide essentially unbiased estimates of coefficient parameters as well as their standard errors when appropriate assumptions are met. Furthermore, we show how one can utilize the fully observed covariate data to inform the pooling strategy, yielding a high level of statistical efficiency at a fraction of the total lab cost.

Indexed as

AlgorithmsLikelihood FunctionsLinear ModelsAbortion, SpontaneousBiomarkersChemokine CCL2Computer SimulationFemaleHumansMonte Carlo MethodPregnancyBiomarkersChemokine CCL2BiomarkersDesignEfficiencyMCEMPooled specimensSkewness

Identifiers

PMID24521420
PMCPMC3988986

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.