Evidence map›Paper›PMID 24520343›Full record

ArticlePloS one2014

Genetic diversity of PCR-positive, culture-negative and culture-positive Mycobacterium ulcerans isolated from Buruli ulcer patients in Ghana.

Heather Williamson, Richard Phillips, Stephen Sarfo, Mark Wansbrough-Jones, Pamela Small

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Spatiotemporal distribution ofEmerging microbes & infections · 2025
    Article
  4. Review
  5. Variable Number Tandem Repeat Profiling ofFrontiers in microbiology · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Genotyping Tools forMycobacterial diseases : tuberculosis & leprosy · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Heather WilliamsonUniversity of Tennessee, Knoxville, Tennessee, United States of America.
Richard PhillipsKomfo Anokye Teaching Hospital (KATH), Kwame Nkrumah University of Science and Technology (KNUST), Kumasi, Ghana.
Stephen SarfoKomfo Anokye Teaching Hospital (KATH), Kwame Nkrumah University of Science and Technology (KNUST), Kumasi, Ghana.
Mark Wansbrough-JonesSt. George's, University of London, London, United Kingdom.
Pamela SmallUniversity of Tennessee, Knoxville, Tennessee, United States of America.
University of Tennessee at Knoxville · USKomfo Anokye Teaching Hospital · GHKwame Nkrumah University of Science and Technology · GHSt George's, University of London · GB

Funding

Ecological relationships of Mycobacterium InfectionR01TW007550 · FIC · MICHIGAN STATE UNIVERSITY · PI MERRITT, RICHARD WILLIAM · 2005 to 2009
$2.0M
FIC NIH HHS 1 R01 TW007550FIC NIH HHS R01 TW007550Medical Research Council MR/J01477X/1NIAID NIH HHS 1 R03 AI026719-01A1
6 · The paper itself

Abstract

Culture of Mycobacterium ulcerans from Buruli ulcer patients has very low sensitivity. Thus confirmation of M. ulcerans infection is primarily based on PCR directed against IS2404. In this study we compare the genotypes obtained by variable number of tandem repeat analysis of DNA from IS2404-PCR positive cultures with that obtained from IS2404 positive, culture-negative tissue. A significantly greater genetic heterogeneity was found among culture-negative samples compared with that found in cultured strains but a single genotype is over-represented in both sample sets. This study provides evidence that both the focal location of bacteria in a lesion as well as differences in the ability to culture a particular genotype may underlie the low sensitivity of culture. Though preliminary, data from this work also suggests that mycobacteria previously associated with fish disease (M. pseudoshottsii) may be pathogenic for humans.

Indexed as

Genetic VariationBiopsyBuruli UlcerGhanaHumansMinisatellite RepeatsMycobacterium ulceransPolymerase Chain Reaction

Identifiers

PMID24520343
PMCPMC3919753
OpenAlexW2072427386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.