Evidence map›Paper›PMID 24520069›Full record

ArticleAngewandte Chemie (International ed. in English)2014

Accurate zygote-specific discrimination of single-nucleotide polymorphisms using microfluidic electrochemical DNA melting curves.

Allen H J Yang, Kuangwen Hsieh, Adriana S Patterson, B Scott Ferguson, Michael Eisenstein, Kevin W Plaxco, H Tom Soh

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Allen H J YangDepartment of Mechanical Engineering, University of California Santa Barbara (USA).
Kuangwen Hsieh
Adriana S Patterson
B Scott Ferguson
Michael Eisenstein
Kevin W Plaxco
H Tom Soh
University of California, Santa Barbara · US

Funding

QPASS: Quantitative Parallel Aptamer Selection SystemU54DK093467 · NIDDK · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SMITH, LLOYD M, SOH, HYONGSOK TOM · 2011 to 2013
$3.2M
Strain Specific Detection of Influenza at the Point-of-CareR01EB009764 · NIBIB · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SOH, HYONGSOK TOM · 2009 to 2012
$1.5M
NIBIB NIH HHS R01 EB009764NIDDK NIH HHS U54 DK093467
6 · The paper itself

Abstract

We report the first electrochemical system for the detection of single-nucleotide polymorphisms (SNPs) that can accurately discriminate homozygous and heterozygous genotypes using microfluidics technology. To achieve this, our system performs real-time melting-curve analysis of surface-immobilized hybridization probes. As an example, we used our sensor to analyze two SNPs in the apolipoprotein E (ApoE) gene, where homozygous and heterozygous mutations greatly affect the risk of late-onset Alzheimer's disease. Using probes specific for each SNP, we simultaneously acquired melting curves for probe-target duplexes at two different loci and thereby accurately distinguish all six possible ApoE allele combinations. Since the design of our device and probes can be readily adapted for targeting other loci, we believe that our method offers a modular platform for the diagnosis of SNP-based diseases and personalized medicine.

Indexed as

DNAElectrochemistryHumansMicrofluidic Analytical TechniquesMicrofluidicsPathology, MolecularPolymorphism, Single NucleotideZygoteDNADNAelectrochemistrymicrofluidicsmolecular diagnostics

Identifiers

PMID24520069
PMCPMC3992926
OpenAlexW2120425946

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.