Evidence map›Paper›PMID 24519896›Full record

ArticleBioEssays : news and reviews in molecular, cellular and developmental biology2014

Beyond transcriptional silencing: is methylcytosine a widely conserved eukaryotic DNA elimination mechanism?

John R Bracht

Abstract read
In one paragraph

Article in BioEssays : news and reviews in molecular, cellular and developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Delete and survive: strategies of programmed genetic material elimination in eukaryotes.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

John R BrachtDepartment of Ecology and Evolutionary Biology, Princeton University, Guyot Hall, Princeton, NJ, USA.

Funding

Epigenetic regulation of programmed genome instability in O. trifallaxF32GM099462 · NIGMS · PRINCETON UNIVERSITY · PI BRACHT, JOHN RUSSELL · 2012 to 2013
$106k
NIGMS NIH HHS 1F32GM099462NIGMS NIH HHS F32 GM099462
6 · The paper itself

Abstract

Methylation of cytosine DNA residues is a well-studied epigenetic modification with important roles in formation of heterochromatic regions of the genome, and also in tissue-specific repression of transcription. However, we recently found that the ciliate Oxytricha uses methylcytosine in a novel DNA elimination pathway important for programmed genome restructuring. Remarkably, mounting evidence suggests that methylcytosine can play a dual role in ciliates, repressing gene expression during some life-stages and directing DNA elimination in others. In this essay, I describe these recent advances in the DNA methylation field and discuss whether this unexpected novel role for methylcytosine in DNA elimination might be more widely conserved in eukaryotic biology, particularly in apoptotic pathways.

Indexed as

DNA MethylationGene ExpressionCiliophoraCytosineDNAEpigenesis, GeneticEukaryotic CellsHeterochromatinHistonesOxytrichaTetrahymenaCytosineDNAHeterochromatinHistonesapoptosisepigeneticsgenome rearrangementmethylcytosineOxytricha

Identifiers

PMID24519896
PMCPMC4162090

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.