Evidence map›Paper›PMID 24517887›Full record

ArticleThe journal of physical chemistry. B2014

Coupled enzyme reactions performed in heterogeneous reaction media: experiments and modeling for glucose oxidase and horseradish peroxidase in a PEG/citrate aqueous two-phase system.

William M Aumiller, Bradley W Davis, Negar Hashemian, Costas Maranas, Antonios Armaou, Christine D Keating

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Thermostable Bacterial Collagenolytic Proteases: A Review.Journal of microbiology and biotechnology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

William M AumillerDepartment of Chemistry and ‡Department of Chemical Engineering, The Pennsylvania State University , University Park, Pennsylvania 16802, United States.
Bradley W Davis
Negar Hashemian
Costas Maranas
Antonios Armaou
Christine D Keating

Funding

Artificial Metabolons: Models for proximity-driven control over multienzyme pathwR01GM078352 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI KEATING, CHRISTINE D · 2009 to 2012
$1.6M
NIGMS NIH HHS R01 GM078352NIGMS NIH HHS R01GM078352
6 · The paper itself

Abstract

The intracellular environment in which biological reactions occur is crowded with macromolecules and subdivided into microenvironments that differ in both physical properties and chemical composition. The work described here combines experimental and computational model systems to help understand the consequences of this heterogeneous reaction media on the outcome of coupled enzyme reactions. Our experimental model system for solution heterogeneity is a biphasic polyethylene glycol (PEG)/sodium citrate aqueous mixture that provides coexisting PEG-rich and citrate-rich phases. Reaction kinetics for the coupled enzyme reaction between glucose oxidase (GOX) and horseradish peroxidase (HRP) were measured in the PEG/citrate aqueous two-phase system (ATPS). Enzyme kinetics differed between the two phases, particularly for the HRP. Both enzymes, as well as the substrates glucose and H2O2, partitioned to the citrate-rich phase; however, the Amplex Red substrate necessary to complete the sequential reaction partitioned strongly to the PEG-rich phase. Reactions in ATPS were quantitatively described by a mathematical model that incorporated measured partitioning and kinetic parameters. The model was then extended to new reaction conditions, i.e., higher enzyme concentration. Both experimental and computational results suggest mass transfer across the interface is vital to maintain the observed rate of product formation, which may be a means of metabolic regulation in vivo. Although outcomes for a specific system will depend on the particulars of the enzyme reactions and the microenvironments, this work demonstrates how coupled enzymatic reactions in complex, heterogeneous media can be understood in terms of a mathematical model.

Indexed as

CitratesGlucose OxidaseHorseradish PeroxidaseKineticsMicroscopy, ConfocalModels, TheoreticalOxazinesPolyethylene GlycolsSodium CitrateCitratesGlucose OxidaseHorseradish PeroxidaseOxazinesPolyethylene GlycolsresorufinSodium Citrate

Identifiers

PMID24517887
PMCPMC3983363

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.