Evidence map›Paper›PMID 24516468›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2013

Effects of open drainage ditch design on bacterial and fungal communities of cold waterlogged paddy soils.

Shanlian Qiu, M K Wang, Fei Wang, Jichen Chen, Xiaoyan Li, Qinghua Li, Cheng Lin, Xinjian Lin

Abstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shanlian QiuSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.
M K WangFujian Academy of Agricultural Sciences, Fuzhou, China.
Fei WangSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.
Jichen ChenSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.
Xiaoyan LiCollege of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Qinghua LiSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.
Cheng LinSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.
Xinjian LinSoil and Fertilizer Institute, Fujian Academy of Agricultural Sciences, Fuzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A field experiment established in 1980 was conducted to evaluate the effects of open drainage ditch applied for water removal on bacterial and fungal communities of cold waterlogged paddy soils in 2011. In this experiment, traditional plate counting and temperature gradient gel electrophoresis were employed to characterize the abundance and diversity of soil bacterial and fungal communities. Four different distances from the open drainage ditch, 5, 15, 25 and 75 m with different degrees of drainage were designed for this study. Maximum populations of culturable aerobic bacteria and fungi were at 15-m distance while minimum populations were at 75-m distance. Significant differences (p < 0.05) in fungal populations were observed at all distances from open drainage ditch. The highest diversity of the bacterial community was found at a distance of 25 m, while that of the fungal community was observed at a distance of 5 m. Sequencing of excised TGGE bands indicated that the dominant bacteria at 75-m distance belonged to anaerobic or microaerobic bacteria. Relationships between microbial characteristics and soil physicochemical properties indicated that soil pH and available nitrogen contents were key factors controlling the abundance of culturable aerobic bacteria and fungi, while soil water capacity also affected the diversity of fungal community. These findings can provide the references for better design and advanced management of the drainage ditches in cold waterlogged paddy soils.

Indexed as

BiotaChemical PhenomenaSoil MicrobiologyBacteriaCluster AnalysisCold TemperatureDenaturing Gradient Gel ElectrophoresisDNA, BacterialDNA, FungalDNA, RibosomalDrainageFungiGenes, rRNAHydrogen-Ion ConcentrationMolecular Sequence DataNitrogenDNA, BacterialDNA, FungalDNA, RibosomalNitrogenRNA, BacterialRNA, FungalRNA, Ribosomal, 16SRNA, Ribosomal, 18SSoilabundancebacterial and fungal communitiesdiversityopen drainage ditch

Identifiers

PMID24516468
PMCPMC3910221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.