Evidence map›Paper›PMID 24516384›Full record

ArticlePLoS pathogens2014

Viral microRNA effects on pathogenesis of polyomavirus SV40 infections in syrian golden hamsters.

Shaojie Zhang, Vojtech Sroller, Preeti Zanwar, Chun Jung Chen, Steven J Halvorson, Nadim J Ajami, Corey W Hecksel, Jody L Swain, Connie Wong, Christopher S Sullivan and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Biology of Polyomavirus miRNA.Frontiers in microbiology · 2021
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Viral noncoding RNAs: more surprises.Genes & development · 2015
    Review
  11. Article
  12. Article
  13. Polyomavirus miRNAs: the beginning.Current opinion in virology · 2014
    Review
  14. Viral microRNA genomics and target validation.Current opinion in virology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shaojie ZhangDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Vojtech SrollerDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Preeti ZanwarDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Chun Jung ChenDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.
Steven J HalvorsonDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Nadim J AjamiDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Corey W HeckselDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Jody L SwainDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America ; Center for Comparative Medicine, Baylor College of Medicine, Houston, Texas, United States of America.
Connie WongDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Christopher S SullivanDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.
Janet S ButelDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor College of Medicine · USThe University of Texas at Austin · US

Funding

Hamster Model of SV40 Infection and DiseaseR01CA134524 · NCI · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 2009 to 2012
$1.3M
Role of microRNAs in the SV40 infectious cycleR01AI077746 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI SULLIVAN, CHRISTOPHER S. · 2009 to 2012
$1.1M
NCI NIH HHS R01 CA134524NIAID NIH HHS R01 AI077746
6 · The paper itself

Abstract

Effects of polyomavirus SV40 microRNA on pathogenesis of viral infections in vivo are not known. Syrian golden hamsters are the small animal model for studies of SV40. We report here effects of SV40 microRNA and influence of the structure of the regulatory region on dynamics of SV40 DNA levels in vivo. Outbred young adult hamsters were inoculated by the intracardiac route with 1×10⁷ plaque-forming units of four different variants of SV40. Infected animals were sacrificed from 3 to 270 days postinfection and viral DNA loads in different tissues determined by quantitative real-time polymerase chain reaction assays. All SV40 strains displayed frequent establishment of persistent infections and slow viral clearance. SV40 had a broad tissue tropism, with infected tissues including liver, kidney, spleen, lung, and brain. Liver and kidney contained higher viral DNA loads than other tissues; kidneys were the preferred site for long-term persistent infection although detectable virus was also retained in livers. Expression of SV40 microRNA was demonstrated in wild-type SV40-infected tissues. MicroRNA-negative mutant viruses consistently produced higher viral DNA loads than wild-type SV40 in both liver and kidney. Viruses with complex regulatory regions displayed modestly higher viral DNA loads in the kidney than those with simple regulatory regions. Early viral transcripts were detected at higher levels than late transcripts in liver and kidney. Infectious virus was detected infrequently. There was limited evidence of increased clearance of microRNA-deficient viruses. Wild-type and microRNA-negative mutants of SV40 showed similar rates of transformation of mouse cells in vitro and tumor induction in weanling hamsters in vivo. This report identified broad tissue tropism for SV40 in vivo in hamsters and provides the first evidence of expression and function of SV40 microRNA in vivo. Viral microRNA dampened viral DNA levels in tissues infected by SV40 strains with simple or complex regulatory regions.

Indexed as

AnimalsCricetinaeFemaleMaleMesocricetusMicroRNAsPolyomavirus InfectionsReal-Time Polymerase Chain ReactionRNA, ViralSimian virus 40Tumor Virus InfectionsViral LoadMicroRNAsRNA, Viral

Identifiers

PMID24516384
PMCPMC3916418
OpenAlexW2093247811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.