Evidence map›Paper›PMID 24516165›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Single-particle EM reveals the higher-order domain architecture of soluble guanylate cyclase.

Melody G Campbell, Eric S Underbakke, Clinton S Potter, Bridget Carragher, Michael A Marletta

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 64 citations in OpenAlex.

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  18. Redox regulation of soluble guanylyl cyclase.Nitric oxide : biology and chemistry · 2018
    Review
  19. CaFrontiers in molecular neuroscience · 2018
    Article
  20. Role of the nucleotidyl cyclase helical domain in catalytically active dimer formation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Melody G CampbellDepartment of Integrative Structural and Computational Biology, National Resource for Automated Molecular Microscopy, and Department of Chemistry, The Scripps Research Institute, La Jolla, CA, 92037.
Eric S Underbakke
Clinton S Potter
Bridget Carragher
Michael A Marletta
Scripps Research Institute · US

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI KIEFT, JEFFREY S · 2012 to 2021
$14.7M
Mapping The Domain Architecture And Conformations of Soluble Guanylate CyclaseF32GM093564 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI UNDERBAKKE, ERIC STEVEN · 2010 to 2012
$126k
NIGMS NIH HHS 5F32GM093564NIGMS NIH HHS 9 P41 GM103310NIGMS NIH HHS F32 GM093564NIGMS NIH HHS P41 GM103310
6 · The paper itself

Abstract

Soluble guanylate cyclase (sGC) is the primary nitric oxide (NO) receptor in mammals and a central component of the NO-signaling pathway. The NO-signaling pathways mediate diverse physiological processes, including vasodilation, neurotransmission, and myocardial functions. sGC is a heterodimer assembled from two homologous subunits, each comprised of four domains. Although crystal structures of isolated domains have been reported, no structure is available for full-length sGC. We used single-particle electron microscopy to obtain the structure of the complete sGC heterodimer and determine its higher-order domain architecture. Overall, the protein is formed of two rigid modules: the catalytic dimer and the clustered Per/Art/Sim and heme-NO/O2-binding domains, connected by a parallel coiled coil at two hinge points. The quaternary assembly demonstrates a very high degree of flexibility. We captured hundreds of individual conformational snapshots of free sGC, NO-bound sGC, and guanosine-5'-[(α,β)-methylene]triphosphate-bound sGC. The molecular architecture and pronounced flexibility observed provides a significant step forward in understanding the mechanism of NO signaling.

Indexed as

Models, MolecularProtein ConformationAnimalsCloning, MolecularEnzyme ActivatorsGuanylate CyclaseImage Processing, Computer-AssistedMicroscopy, Electron, TransmissionProtein BindingProtein Structure, TertiaryRatsReceptors, Cytoplasmic and NuclearSoluble Guanylyl CyclaseEnzyme ActivatorsGuanylate CyclaseReceptors, Cytoplasmic and NuclearSoluble Guanylyl Cyclase

Identifiers

PMID24516165
PMCPMC3939929
OpenAlexW2055625563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.