Evidence map›Paper›PMID 24515897›Full record

ArticleAnnals of neurology2014

Genetics of low spinal muscular atrophy carrier frequency in sub-Saharan Africa.

Modibo Sangaré, Brant Hendrickson, Hammadoun Ali Sango, Kelian Chen, Jonathan Nofziger, Abdelbasset Amara, Amalia Dutra, Alice B Schindler, Aldiouma Guindo, Mahamadou Traoré and 26 more

Open access · hybridAbstract read
In one paragraph

Article in Annals of neurology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Current profile of Charcot-Marie-Tooth disease in Africa: A systematic review.Journal of the peripheral nervous system : JPNS · 2022
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. ComplexNeurology. Genetics · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Genomic Variability in the Survival Motor Neuron Genes (International journal of molecular sciences · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 8 institutions in 3 countries.

Modibo SangaréNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, NIH, Bethesda, MD; Institute of Biomedical Sciences, George Washington University, Washington, DC.
Brant Hendrickson
Hammadoun Ali Sango
Kelian Chen
Jonathan Nofziger
Abdelbasset Amara
Amalia Dutra
Alice B Schindler
Aldiouma Guindo
Mahamadou Traoré
George Harmison
Evgenia Pak
Fatoumata N'Go Yaro
Katherine Bricceno
Christopher Grunseich
Guibin Chen
Manfred Boehm
Kristen Zukosky
Nouhoum Bocoum
Katherine G Meilleur
Fatoumata Daou
Koumba Bagayogo
Yaya Ibrahim Coulibaly
Mahamadou Diakité
Michael P Fay
Hee-Suk Lee
Ali Saad
Moez Gribaa
Andrew B Singleton
Youssoufa Maiga
Sungyoung Auh
Guida Landouré
Rick M Fairhurst
Barrington G Burnett
Thomas Scholl
Kenneth H Fischbeck
National Institute of Neurological Disorders and Stroke · USUniversity of Bamako · MLHôpital Farhat Hached · TNNational Heart Lung and Blood Institute · USNational Human Genome Research Institute · USNational Institute of Allergy and Infectious Diseases · USSequenom (United States) · USNational Institute on Aging · US

Funding

NHGRI/DIR Cytogenetics and Microscopy CoreZICHG200348 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI WINCOVITCH, STEPHEN · 2010 to 2025
$20.3M
Studies of Hereditary Neurological Disease: Disease MechanismsZIANS003038 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI FISCHBECK, KENNETH · 2009 to 2023
$19.5M
Mali International Center for Excellence in Research: Vectors and Hosts of Parasitic Infectious DiseasesZIAAI001062 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LEHMANN, TOVI · 2009 to 2025
$17.3M
iPS-technology and patient specific disease modelsZIAHL006079 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI BOEHM, MANFRED · 2010 to 2025
$14.4M
Genetic analysis in families with neurological diseaseZIAAG000958 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2009 to 2024
$10.9M
Malaria Pathogenesis and Human ImmunityZIAAI001000 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI FAIRHURST, RICK · 2009 to 2017
$9.3M
Research in Congenital Muscle DiseaseZIANR000026 · NINR · NATIONAL INSTITUTE OF NURSING RESEARCH · PI MEILLEUR, KATHERINE · 2013 to 2019
$4.5M
Clinical and genetic studies of hereditary neurological disorders in MaliU01HG007044 · NHGRI · UNIV OF SCIENCES, TECH & TECH OF BAMAKO · PI LANDOURE, GUIDA · 2013 to 2022
$3.1M
Intramural NIH HHSNHGRI NIH HHS U01 HG007044
6 · The paper itself

Abstract

objectiveSpinal muscular atrophy (SMA) is one of the most common severe hereditary diseases of infancy and early childhood in North America, Europe, and Asia. SMA is usually caused by deletions of the survival motor neuron 1 (SMN1) gene. A closely related gene, SMN2, modifies the disease severity. SMA carriers have only 1 copy of SMN1 and are relatively common (1 in 30-50) in populations of European and Asian descent. SMN copy numbers and SMA carrier frequencies have not been reliably estimated in Malians and other sub-Saharan Africans.

methodsWe used a quantitative polymerase chain reaction assay to determine SMN1 and SMN2 copy numbers in 628 Malians, 120 Nigerians, and 120 Kenyans. We also explored possible mechanisms for SMN1 and SMN2 copy number differences in Malians, and investigated their effects on SMN mRNA and protein levels.

resultsThe SMA carrier frequency in Malians is 1 in 209, lower than in Eurasians. Malians and other sub-Saharan Africans are more likely to have ≥3 copies of SMN1 than Eurasians, and more likely to lack SMN2 than Europeans. There was no evidence of gene conversion, gene locus duplication, or natural selection from malaria resistance to account for the higher SMN1 copy numbers in Malians. High SMN1 copy numbers were not associated with increased SMN mRNA or protein levels in human cell lines.

interpretationSMA carrier frequencies are much lower in sub-Saharan Africans than in Eurasians. This finding is important to consider in SMA genetic counseling in individuals with black African ancestry.

Indexed as

Africa South of the SaharaDNA Copy Number VariationsFemaleGenetic Predisposition to DiseaseHumansMaleMuscular Atrophy, SpinalRNA, MessengerSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 2 ProteinRNA, MessengerSMN1 protein, humanSMN2 protein, humanSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 2 Protein

Identifiers

PMID24515897
PMCPMC4112719
OpenAlexW1894046160

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.