Evidence map›Paper›PMID 24515436›Full record

ArticleMolecular and cellular biology2014

ANKRD1 acts as a transcriptional repressor of MMP13 via the AP-1 site.

Karinna Almodóvar-García, Minjae Kwon, Susan E Samaras, Jeffrey M Davidson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

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  10. Understanding the molecular basis of cardiomyopathy.American journal of physiology. Heart and circulatory physiology · 2022
    Review
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  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Karinna Almodóvar-GarcíaDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Minjae Kwon
Susan E Samaras
Jeffrey M Davidson
Vanderbilt University · US

Funding

Vanderbilt/Meharry Initiative for Minority Student DvptR25GM062459 · NIGMS · VANDERBILT UNIVERSITY · PI VELEZ EDWARDS, DIGNA R · 2002 to 2020
$10.4M
CARP: Angiogenic Gene Therapy in Diabetic WoundsR01DK065656 · NIDDK · VANDERBILT UNIVERSITY · PI DAVIDSON, JEFFREY M. · 2003 to 2011
$2.3M
Distinct roles of CARP target genes in wound healingF31GM101947 · NIGMS · VANDERBILT UNIVERSITY · PI ALMODOVAR, KARINNA · 2012 to 2013
$70k
NIDDK NIH HHS 5R01 DK065656-08NIDDK NIH HHS R01 DK065656NIGMS NIH HHS 1F31 GM101947-01NIGMS NIH HHS F31 GM101947NIGMS NIH HHS R25 GM062459
6 · The paper itself

Abstract

The transcriptional cofactor ANKRD1 is sharply induced during wound repair, and its overexpression enhances healing. We recently found that global deletion of murine Ankrd1 impairs wound contraction and enhances necrosis of ischemic wounds. A quantitative PCR array of Ankrd1(-/-) (KO) fibroblasts indicated that ANKRD1 regulates MMP genes. Yeast two-hybrid and coimmunoprecipitation analyses associated ANKRD1 with nucleolin, which represses AP-1 activation of MMP13. Ankrd1 deletion enhanced both basal and phorbol 12-myristate 13-acetate (PMA)-induced MMP13 promoter activity; conversely, Ankrd1 overexpression in control cells decreased PMA-induced MMP13 promoter activity. Ankrd1 reconstitution in KO fibroblasts decreased MMP13 mRNA, while Ankrd1 knockdown increased these levels. MMP13 mRNA and protein were elevated in intact skin and wounds of KO versus Ankrd1(fl/fl) (FLOX) mice. Electrophoretic mobility shift assay gel shift patterns suggested that additional transcription factors bind to the MMP13 AP-1 site in the absence of Ankrd1, and this concept was reinforced by chromatin immunoprecipitation analysis as greater binding of c-Jun to the AP-1 site in extracts from FLOX versus KO fibroblasts. We propose that ANKRD1, in association with factors such as nucleolin, represses MMP13 transcription. Ankrd1 deletion additionally relieved MMP10 transcriptional repression. Nuclear ANKRD1 appears to modulate extracellular matrix remodeling by MMPs.

Indexed as

AnimalsCell LineFibroblastsGene ExpressionMatrix Metalloproteinase 13MiceMice, KnockoutMuscle ProteinsNuclear ProteinsNucleolinPhosphoproteinsPromoter Regions, GeneticRepressor ProteinsRNA-Binding ProteinsRNA, MessengerSequence DeletionAnkrd1 protein, mouseMatrix Metalloproteinase 13Mmp13 protein, mouseMuscle ProteinsNuclear ProteinsNucleolinPhosphoproteinsRepressor ProteinsRNA-Binding ProteinsRNA, MessengerTranscription Factor AP-1

Identifiers

PMID24515436
PMCPMC3993579
OpenAlexW2064737206

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.