Evidence map›Paper›PMID 24514424›Full record

ArticleLeukemia2014

Epigenetic regulation of GATA2 and its impact on normal karyotype acute myeloid leukemia.

M Celton, A Forest, G Gosse, S Lemieux, J Hebert, G Sauvageau, B T Wilhelm

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 38 citations in OpenAlex.

  1. PML::RARA and GATA2 proteins interact via DNA templates to induce aberrant self-renewal in mouse and human hematopoietic cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Article
  3. Role of the pioneer transcription factor GATA2 in health and disease.Journal of molecular medicine (Berlin, Germany) · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Germline GATA2 Mutation and Bone Marrow Failure.Hematology/oncology clinics of North America · 2018
    Review
  18. Heterogeneity of GATA2-related myeloid neoplasms.International journal of hematology · 2017
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

M Celton1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Laboratory for high-throughput genomics, Montreal, Québec, Canada [3] INRA, UMR1083, Sciences Pour l'Oenologie, Montpellier, France.
A Forest1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Laboratory for high-throughput genomics, Montreal, Québec, Canada.
G Gosse1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Laboratory for high-throughput genomics, Montreal, Québec, Canada.
S Lemieux1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Laboratory for Functional and Structural Bioinformatics, Montreal, Québec, Canada.
J Hebert1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Leukemia Cell Bank of Quebec and Division of Hematology, Maisonneuve-Rosemont Hospital, Montreal, Québec, Canada.
G Sauvageau1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Leukemia Cell Bank of Quebec and Division of Hematology, Maisonneuve-Rosemont Hospital, Montreal, Québec, Canada [3] Laboratory for Molecular Genetics of Stem Cells, Montreal, Québec, Canada.
B T Wilhelm1] Department of Medicine, Institute for Research in Immunology and Cancer, Université de Montreal, Montreal, Québec, Canada [2] Laboratory for high-throughput genomics, Montreal, Québec, Canada.
Institute for Research in Immunology and Cancer · CASorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The GATA2 gene encodes a zinc-finger transcription factor that acts as a master regulator of normal hematopoiesis. Mutations in GATA2 have been implicated in the development of myelodysplastic syndrome and acute myeloid leukemia (AML). Using RNA sequencing we now report that GATA2 is either mutated with a functional consequence, or expressed at low levels in the majority of normal karyotype AML (NK-AML). We also show that low-GATA2-expressing specimens (GATA2(low)) exhibit allele-specific expression (ASE) (skewing) in more than half of AML patients examined. We demonstrate that the hypermethylation of the silenced allele can be reversed by exposure to demethylating agents, which also restores biallelic expression of GATA2. We show that GATA2(low) AML lack the prototypical R882 mutation in DNMT3A frequently observed in NK-AML patients and that The Cancer Genome Atlas AML specimens with DNMT3A R882 mutations are characterized by CpG hypomethylation of GATA2. Finally, we validate that several known missense single-nucleotide polymorphisms in GATA2 are actually loss-of-function variants, which, when combined with ASE, represent the equivalent of homozygous GATA2 mutations. From a broader perspective, this work suggests for the first time that determinants of ASE likely have a key role in human leukemia.

Indexed as

Epigenesis, GeneticAllelesCell Line, TumorDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3AGATA2 Transcription FactorHumansKaryotypeLeukemia, Myeloid, AcuteMutationPolymorphism, Single NucleotideDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNMT3A protein, humanGATA2 protein, humanGATA2 Transcription Factor

Identifiers

PMID24514424
OpenAlexW2075841564

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.