Evidence map›Paper›PMID 24514026›Full record

ArticleThe EMBO journal2014

RNA:DNA hybrids are a novel molecular pattern sensed by TLR9.

Rachel E Rigby, Lauren M Webb, Karen J Mackenzie, Yue Li, Andrea Leitch, Martin A M Reijns, Rachel J Lundie, Ailsa Revuelta, Donald J Davidson, Sandra Diebold and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 1 synthesis or guideline pooled it, 158 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Article
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  7. Article
  8. Article
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  12. Endogenous retroelements promote tolerance to dietary antigens.bioRxiv : the preprint server for biology · 2025
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  14. Review
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  16. Mechanisms underlining R-loop biology and implications for human disease.Frontiers in cell and developmental biology · 2025
    Review
  17. Article
  18. Article
  19. Understanding the impact ofFrontiers in molecular biosciences · 2024
    Review
  20. Review

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Rachel E RigbyMRC Human Genetics Unit, MRC IGMM University of Edinburgh, Edinburgh, UK.
Lauren M Webb
Karen J Mackenzie
Yue Li
Andrea Leitch
Martin A M Reijns
Rachel J Lundie
Ailsa Revuelta
Donald J Davidson
Sandra Diebold
Yorgo Modis
Andrew S MacDonald
Andrew P Jackson
University of Edinburgh · GBCentre for Immunity, Infection and Evolution · GBYale University · USKing's College London · GB

Funding

The structural basis of nucleic acid recognition by Toll-like receptorsR01GM102869 · NIGMS · YALE UNIVERSITY · PI MODIS, YORGO · 2012 to 2015
$1.1M
European Research Council 281847Medical Research Council G0701437Medical Research Council G1002046Medical Research Council G34175Medical Research Council MC_PC_U127580972NIGMS NIH HHS R01 GM102869NIGMS NIH HHS R01 GM102869-01
6 · The paper itself

Abstract

The sensing of nucleic acids by receptors of the innate immune system is a key component of antimicrobial immunity. RNA:DNA hybrids, as essential intracellular replication intermediates generated during infection, could therefore represent a class of previously uncharacterised pathogen-associated molecular patterns sensed by pattern recognition receptors. Here we establish that RNA:DNA hybrids containing viral-derived sequences efficiently induce pro-inflammatory cytokine and antiviral type I interferon production in dendritic cells. We demonstrate that MyD88-dependent signalling is essential for this cytokine response and identify TLR9 as a specific sensor of RNA:DNA hybrids. Hybrids therefore represent a novel molecular pattern sensed by the innate immune system and so could play an important role in host response to viruses and the pathogenesis of autoimmune disease.

Indexed as

Models, ImmunologicalAnimalsBlotting, WesternDendritic CellsEndosomesEnzyme-Linked Immunosorbent AssayFlow CytometryFluorescence PolarizationFluorescent Antibody TechniqueHumansImmunity, InnateImmunoblottingMiceMice, Inbred C57BLMyeloid Differentiation Factor 88Nucleic Acid HeteroduplexesMyeloid Differentiation Factor 88Nucleic Acid HeteroduplexesToll-Like Receptor 9

Identifiers

PMID24514026
PMCPMC3989650
OpenAlexW1982718713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.