Evidence map›Paper›PMID 24511468›Full record

ArticleStem cell reports2014

Bright/Arid3A acts as a barrier to somatic cell reprogramming through direct regulation of Oct4, Sox2, and Nanog.

Melissa Popowski, Troy D Templeton, Bum-Kyu Lee, Catherine Rhee, He Li, Cathrine Miner, Joseph D Dekker, Shari Orlanski, Yehudit Bergman, Vishwanath R Iyer and 2 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. PNAS nexus · 2024
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  6. Integration of TE Induces Cancer Specific Alternative Splicing Events.International journal of molecular sciences · 2022
    Review
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  11. LIN28B/Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Potential application of cell reprogramming techniques for cancer research.Cellular and molecular life sciences : CMLS · 2019
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Melissa PopowskiInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Troy D TempletonImmunobiology and Cancer Program, Oklahoma Medical Research Foundation, Departments of Cell Biology and Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Bum-Kyu LeeInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Catherine RheeInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
He LiImmunobiology and Cancer Program, Oklahoma Medical Research Foundation, Departments of Cell Biology and Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Cathrine MinerImmunobiology and Cancer Program, Oklahoma Medical Research Foundation, Departments of Cell Biology and Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Joseph D DekkerInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Shari OrlanskiDepartment of Developmental Biology and Cancer Research, The Hebrew University Medical School, Jerusalem 91120, Israel.
Yehudit BergmanDepartment of Developmental Biology and Cancer Research, The Hebrew University Medical School, Jerusalem 91120, Israel.
Vishwanath R IyerInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Carol F WebbImmunobiology and Cancer Program, Oklahoma Medical Research Foundation, Departments of Cell Biology and Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Haley TuckerInstitute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
The University of Texas at Austin · USOklahoma Medical Research Foundation · USHebrew University of Jerusalem · ILUniversity of Oklahoma Health Sciences Center · US

Funding

The Epigenotype of Human ES CellsP01GM081629 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI THOMSON, JAMES ALEXANDER · 2008 to 2012
$8.9M
Sequential Ion/Ion Reactions for Large Peptide and Whole Protein CharacterizationR01GM080148 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2007 to 2015
$3.0M
MAR MEDIATED GENETIC SWITCH FOR IGH ENHANCER CONTROLR01CA031534 · NCI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI TUCKER, HALEY O · 1985 to 2012
$2.9M
NCI NIH HHS CA-31534NCI NIH HHS R01 CA031534NIGMS NIH HHS P01 GM081629NIGMS NIH HHS R01 GM080148
6 · The paper itself

Abstract

We show here that singular loss of the Bright/Arid3A transcription factor leads to reprograming of mouse embryonic fibroblasts (MEFs) and enhancement of standard four-factor (4F) reprogramming. Bright-deficient MEFs bypass senescence and, under standard embryonic stem cell (ESC) culture conditions, spontaneously form clones that in vitro express pluripotency markers, differentiate to all germ lineages, and in vivo form teratomas and chimeric mice. We demonstrate that BRIGHT binds directly to the promoter/enhancer regions of Oct4, Sox2, and Nanog to contribute to their repression in both MEFs and ESCs. Thus, elimination of the BRIGHT barrier may provide an approach for somatic cell reprogramming.

Indexed as

AnimalsCell LineCellular ReprogrammingCellular SenescenceDNA-Binding ProteinsHomeodomain ProteinsLewis X AntigenMiceNanog Homeobox ProteinOctamer Transcription Factor-3Promoter Regions, GeneticProtein BindingRNA InterferenceRNA, Small InterferingSOXB1 Transcription FactorsTranscription FactorsArid3a protein, mouseDNA-Binding ProteinsHomeodomain ProteinsLewis X AntigenNanog Homeobox ProteinNanog protein, mouseOctamer Transcription Factor-3RNA, Small InterferingSOXB1 Transcription FactorsTranscription Factors

Identifiers

PMID24511468
PMCPMC3916758
OpenAlexW2027134492

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.