Evidence map›Paper›PMID 24510772›Full record

ArticleCurrent protocols in cytometry2014

Real-time detection of protein trafficking with high-throughput flow cytometry (HTFC) and fluorogen-activating protein (FAP) base biosensor.

Yang Wu, Phillip H Tapia, Jonathan Jarvik, Alan S Waggoner, Larry A Sklar

Abstract read
In one paragraph

Article in Current protocols in cytometry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yang WuCenter for Molecular Discovery, University of New Mexico School of Medicine, Albuquerque, New Mexico.
Phillip H TapiaCenter for Molecular Discovery, University of New Mexico School of Medicine, Albuquerque, New Mexico.
Jonathan JarvikDepartment of Biological Sciences, Molecular Biosensor and Imaging Center, Carnegie Mellon University, Pittsburgh, Pennsylvania.
Alan S WaggonerDepartment of Biological Sciences, Molecular Biosensor and Imaging Center, Carnegie Mellon University, Pittsburgh, Pennsylvania.
Larry A SklarCenter for Molecular Discovery, University of New Mexico School of Medicine, Albuquerque, New Mexico.
University of New Mexico · USCarnegie Mellon University · USImaging Center · US

Funding

FLUORESCENT PROBES &IMAGING FOR NETWORKS &PATHWAY(RMI)U54RR022241 · NCRR · MELLON PITTS CORPORATION (MPC CORP) · PI WAGGONER, ALAN S. · 2005 to 2011
$19.9M
Yeast Biology ConsortiumU54MH084690 · NIMH · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI TEGOS, GEORGE P · 2008 to 2013
$14.4M
NCRR NIH HHS 5U54RR022241NCRR NIH HHS U54 RR022241NIMH NIH HHS 1U54MH084690-02NIMH NIH HHS 5U54MH084690-03NIMH NIH HHS U54 MH084690
6 · The paper itself

Abstract

We combined fluorogen-activating protein (FAP) technology with high-throughput flow cytometry to detect real-time protein trafficking to and from the plasma membrane in living cells. The hybrid platform allows drug discovery for trafficking receptors, such as G protein-coupled receptors, receptor tyrosine kinases, and ion channels, which were previously not suitable for high-throughput screening by flow cytometry. The system has been validated using the β2-adrenergic receptor (β2AR) system and extended to other GPCRs. When a chemical library containing ∼ 1200 off-patent drugs was screened against cells expressing FAP-tagged β2AR, all known β2AR active ligands in the library were successfully identified, together with a few compounds that were later confirmed to regulate receptor internalization in a nontraditional manner. The unexpected discovery of new ligands by this approach indicates the potential of using this protocol for GPCR de-orphanization. In addition, screens of multiplexed targets promise improved efficiency with minor protocol modification.

Indexed as

Biosensing TechniquesComputer SystemsEndocytosisFlow CytometryFluorescent DyesHigh-Throughput Screening AssaysHumansProtein TransportReceptors, G-Protein-CoupledU937 CellsFluorescent DyesReceptors, G-Protein-Coupledfluorogen-activating proteinG protein-coupled receptorhigh-throughput flow cytometerlive-cell assayreceptor trafficking

Identifiers

PMID24510772
PMCPMC3961059
OpenAlexW1602307101

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.