Evidence map›Paper›PMID 24510398›Full record

ArticleBiomolecular NMR assignments2015

(1)H, (13)C and (15)N backbone assignment of the EC-1 domain of human E-cadherin.

Vivitri D Prasasty, Mary E Krause, Usman S F Tambunan, Asokan Anbanandam, Jennifer S Laurence, Teruna J Siahaan

Open access · greenAbstract read
In one paragraph

Article in Biomolecular NMR assignments, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Vivitri D PrasastyDepartment of Pharmaceutical Chemistry, The University of Kansas, Lawrence, KS, 66047, USA.
Mary E Krause
Usman S F Tambunan
Asokan Anbanandam
Jennifer S Laurence
Teruna J Siahaan
University of Kansas · USNorth Carolina Exploring Cultural Heritage Online · USUniversity of Indonesia · ID

Funding

TRAFFICKING OF THE PLASMA MEMBRANE CA2+-ATPASE TO RAFTSP20RR017708 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI HOLYOAK, TODD · 2002 to 2011
$20.1M
Protein Structure and FunctionP20GM103420 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2012 to 2012
$2.0M
Modulating the BBB to Improve Drug Delivery to the BrainR01NS075374 · NINDS · UNIVERSITY OF KANSAS LAWRENCE · PI SIAHAAN, TERUNA J. · 2011 to 2015
$1.5M
NCRR NIH HHS P20 RR017708NIGMS NIH HHS P20 GM103420NINDS NIH HHS R01 NS075374NINDS NIH HHS R01 NS075374-01
6 · The paper itself

Abstract

The Extracellular 1 (EC1) domain of E-cadherin has been shown to be important for cadherin-cadherin homophilic interactions. Cadherins are responsible for calcium-mediated cell-cell adhesion located at the adherens junction of the biological barriers (i.e., intestinal mucosa and the blood-brain barrier (BBB)). Cadherin peptides can modulate cadherin interactions to improve drug delivery through the BBB. However, the mechanism of modulating the E-cadherin interactions by cadherin peptides has not been fully elucidated. To provide a basis for subsequent examination of the structure and peptide-binding properties of the EC1 domain of human E-cadherin using solution NMR spectroscopy, the (1)H, (13)C and (15)N backbone resonance of the uniformly labeled-EC1 were assigned and the secondary structure was determined based on the chemical shift values. These resonance assignments are essential for assessing protein-ligand interactions and are reported here.

Indexed as

Nuclear Magnetic Resonance, BiomolecularAmino Acid SequenceCadherinsHumansMolecular Sequence DataProtein Structure, TertiaryCadherins

Identifiers

PMID24510398
PMCPMC4133310
OpenAlexW1997724141

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.