Evidence map›Paper›PMID 24510098›Full record

ArticleNucleic acids research2014

Selective nuclear export of specific classes of mRNA from mammalian nuclei is promoted by GANP.

Vihandha O Wickramasinghe, Robert Andrews, Peter Ellis, Cordelia Langford, John B Gurdon, Murray Stewart, Ashok R Venkitaraman, Ronald A Laskey

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 75 citations in OpenAlex.

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  17. Virus Infection and mRNA Nuclear Export.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Vihandha O WickramasingheMRC Cancer Unit, University of Cambridge, Hutchison/MRC Research Centre, Box 197, Biomedical Campus, Cambridge CB2 0XZ, UK, The Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge CB10 1SA, UK, Wellcome Trust, Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, UK, MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK and Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK.
Robert Andrews
Peter Ellis
Cordelia Langford
John B Gurdon
Murray Stewart
Ashok R Venkitaraman
Ronald A Laskey
MRC Cancer Unit · GBMRC Laboratory of Molecular Biology · GBHutchison/MRC Research Centre · GBUniversity of Cambridge · GBWellcome/Cancer Research UK Gurdon Institute · GBWellcome Sanger Institute · GB

Funding

Department of Health U105178939Medical Research Council G0600332Medical Research Council G1001521Medical Research Council G1001522Medical Research Council MC_U105178939Medical Research Council MC_U105359877Medical Research Council MC_UU_12022/1Medical Research Council MC_UU_12022/8Wellcome Trust 092096Wellcome Trust 101050
6 · The paper itself

Abstract

The nuclear phase of the gene expression pathway culminates in the export of mature messenger RNAs (mRNAs) to the cytoplasm through nuclear pore complexes. GANP (germinal- centre associated nuclear protein) promotes the transfer of mRNAs bound to the transport factor NXF1 to nuclear pore complexes. Here, we demonstrate that GANP, subunit of the TRanscription-EXport-2 (TREX-2) mRNA export complex, promotes selective nuclear export of a specific subset of mRNAs whose transport depends on NXF1. Genome-wide gene expression profiling showed that half of the transcripts whose nuclear export was impaired following NXF1 depletion also showed reduced export when GANP was depleted. GANP-dependent transcripts were highly expressed, yet short-lived, and were highly enriched in those encoding central components of the gene expression machinery such as RNA synthesis and processing factors. After injection into Xenopus oocyte nuclei, representative GANP-dependent transcripts showed faster nuclear export kinetics than representative transcripts that were not influenced by GANP depletion. We propose that GANP promotes the nuclear export of specific classes of mRNAs that may facilitate rapid changes in gene expression.

Indexed as

AcetyltransferasesActive Transport, Cell NucleusAnimalsCell Line, TumorCell NucleusHumansIntracellular Signaling Peptides and ProteinsNucleocytoplasmic Transport ProteinsRNA-Binding ProteinsRNA, MessengerXenopusAcetyltransferasesIntracellular Signaling Peptides and ProteinsMCM3AP protein, humanNucleocytoplasmic Transport ProteinsNXF1 protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID24510098
PMCPMC4005691
OpenAlexW2105292089

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.